Nextflow workflow report

[silly_ampere]

Workflow execution completed successfully!
Run times
Fri Sep 22 11:58:28 CEST 2017 - Fri Sep 22 12:10:16 CEST 2017 (duration: 11m 48s)
Nextflow command
/Users/philewels/GitHub/nextflow/launch.sh run ../main.nf -resume -profile testing --gtf ./test_data/ngi-rna_test_set/genes.gtf --bed12 ./test_data/ngi-rna_test_set/genes.bed --hisat2_index ./test_data/ngi-rna_test_set/r64/ --aligner hisat2 --singleEnd --reads ./test_data/ngi-rna_test_set/*.fastq.gz -with-report test_report.html
Launch directory
/Users/philewels/GitHub/NGI-RNAseq/tests
Work directory
/Users/philewels/GitHub/NGI-RNAseq/tests/work
Project directory
/Users/philewels/GitHub/NGI-RNAseq
Script path
/Users/philewels/GitHub/NGI-RNAseq/main.nf
Script name
main.nf
Script hash
a8dc0d443a9b53eb3b8219c509d373d4
Workflow container
scilifelab/ngi-rnaseq
Workflow profile
testing
Nextflow version
version 0.25.7, build 4668 (22-09-2017 09:42 UTC)
Session ID
5702c4d6-91e6-428d-8e08-ba1de1ea7c1e

Resource Usage

These plots give an overview of the distrubtion of resource usages for each process.

CPU Usage

Memory Usage

Job Duration

Tasks

This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.

task_id process tag name status hash exit submit start module container cpus memory time disk attempt script scratch workdir complete duration realtime %cpu %mem vmem rss peak_vmem peak_rss rchar wchar syscr syscw read_bytes write_bytes native_id