2016-10-03 10:01:37,951 pid=4262 [jointestimate.py] ERROR sample SEP_02-F_HAL_481 did not finish 2016-10-03 10:01:37,954 pid=4262 [jointestimate.py] ERROR sample LOS_01-F_HAL_208 did not finish 2016-10-03 10:01:37,971 pid=4262 [jointestimate.py] ERROR sample VIR_AP13A_VIR_467 did not finish 2016-10-03 10:01:37,989 pid=4262 [jointestimate.py] ERROR sample BOS_13_F_HAL_651 did not finish 2016-10-03 10:01:38,493 pid=4262 [jointestimate.py] ERROR sample SEV_04-F_HAL_291 did not finish 2016-10-03 10:01:38,493 pid=4262 [jointestimate.py] ERROR sample SOM_03_F_HAL_654 did not finish 2016-10-03 10:01:38,494 pid=4262 [jointestimate.py] ERROR sample SAP_01_F_HAL_592 did not finish 2016-10-03 10:01:38,494 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SAP_01_F_HAL_592.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SAP_01_F_HAL_592.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SAP_01_F_HAL_592.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SAP_01_F_HAL_592.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SAP_01_F_HAL_592.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SAP_01_F_HAL_592.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SAP_01_F_HAL_592.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SAP_01_F_HAL_592.clustS.gz') 2016-10-03 10:01:38,495 pid=4262 [jointestimate.py] ERROR sample NDP_01-G1_HAL_218 did not finish 2016-10-03 10:01:38,495 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDP_01-G1_HAL_218.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDP_01-G1_HAL_218.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDP_01-G1_HAL_218.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDP_01-G1_HAL_218.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDP_01-G1_HAL_218.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDP_01-G1_HAL_218.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDP_01-G1_HAL_218.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDP_01-G1_HAL_218.clustS.gz') 2016-10-03 10:01:38,496 pid=4262 [jointestimate.py] ERROR sample HAR_01_F_FIL_709 did not finish 2016-10-03 10:01:38,496 pid=4262 [jointestimate.py] ERROR sample PDF_04-G1_HAL_253 did not finish 2016-10-03 10:01:38,497 pid=4262 [jointestimate.py] ERROR sample HTE_04_F_HAL_515 did not finish 2016-10-03 10:01:38,498 pid=4262 [jointestimate.py] ERROR sample PFL_04-G1_HAL_263 did not finish 2016-10-03 10:01:38,498 pid=4262 [jointestimate.py] ERROR sample DIM_01_F_HAL_660 did not finish 2016-10-03 10:01:38,501 pid=4262 [jointestimate.py] ERROR sample TEM_03_F_HAL_499 did not finish 2016-10-03 10:01:38,504 pid=4262 [jointestimate.py] ERROR sample PDF_03-G1_HAL_252 did not finish 2016-10-03 10:01:38,505 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PDF_03-G1_HAL_252.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PDF_03-G1_HAL_252.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PDF_03-G1_HAL_252.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PDF_03-G1_HAL_252.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PDF_03-G1_HAL_252.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PDF_03-G1_HAL_252.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PDF_03-G1_HAL_252.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PDF_03-G1_HAL_252.clustS.gz') 2016-10-03 10:01:38,505 pid=4262 [jointestimate.py] ERROR sample CHA_07-G1_HAL_064 did not finish 2016-10-03 10:01:38,506 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CHA_07-G1_HAL_064.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CHA_07-G1_HAL_064.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CHA_07-G1_HAL_064.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CHA_07-G1_HAL_064.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CHA_07-G1_HAL_064.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CHA_07-G1_HAL_064.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CHA_07-G1_HAL_064.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CHA_07-G1_HAL_064.clustS.gz') 2016-10-03 10:01:38,506 pid=4262 [jointestimate.py] ERROR sample ERO_05_F_HAL_511 did not finish 2016-10-03 10:01:38,506 pid=4262 [jointestimate.py] ERROR sample RAR_04_F_HAL_897 did not finish 2016-10-03 10:01:38,507 pid=4262 [jointestimate.py] ERROR sample PRT_02-F_HAL_272 did not finish 2016-10-03 10:01:38,507 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PRT_02-F_HAL_272.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PRT_02-F_HAL_272.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PRT_02-F_HAL_272.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PRT_02-F_HAL_272.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PRT_02-F_HAL_272.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PRT_02-F_HAL_272.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PRT_02-F_HAL_272.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PRT_02-F_HAL_272.clustS.gz') 2016-10-03 10:01:38,507 pid=4262 [jointestimate.py] ERROR sample MAP_05_F_HAL_579 did not finish 2016-10-03 10:01:38,507 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MAP_05_F_HAL_579.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MAP_05_F_HAL_579.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MAP_05_F_HAL_579.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MAP_05_F_HAL_579.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MAP_05_F_HAL_579.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MAP_05_F_HAL_579.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MAP_05_F_HAL_579.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MAP_05_F_HAL_579.clustS.gz') 2016-10-03 10:01:38,507 pid=4262 [jointestimate.py] ERROR sample PDT_02-F_HAL_426 did not finish 2016-10-03 10:01:38,519 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDT_02-F_HAL_426.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDT_02-F_HAL_426.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDT_02-F_HAL_426.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDT_02-F_HAL_426.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDT_02-F_HAL_426.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDT_02-F_HAL_426.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDT_02-F_HAL_426.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDT_02-F_HAL_426.clustS.gz') 2016-10-03 10:01:38,519 pid=4262 [jointestimate.py] ERROR sample TEN_02_F_HAL_602 did not finish 2016-10-03 10:01:38,520 pid=4262 [jointestimate.py] ERROR sample ARA_01-F_FIL_461 did not finish 2016-10-03 10:01:38,520 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ARA_01-F_FIL_461.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ARA_01-F_FIL_461.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ARA_01-F_FIL_461.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ARA_01-F_FIL_461.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ARA_01-F_FIL_461.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ARA_01-F_FIL_461.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ARA_01-F_FIL_461.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ARA_01-F_FIL_461.clustS.gz') 2016-10-03 10:01:38,521 pid=4262 [jointestimate.py] ERROR sample CKR_11-G1_HAL_074 did not finish 2016-10-03 10:01:38,522 pid=4262 [jointestimate.py] ERROR sample ALI_03-G1_HAL_006 did not finish 2016-10-03 10:01:38,523 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ALI_03-G1_HAL_006.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ALI_03-G1_HAL_006.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ALI_03-G1_HAL_006.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ALI_03-G1_HAL_006.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ALI_03-G1_HAL_006.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ALI_03-G1_HAL_006.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ALI_03-G1_HAL_006.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ALI_03-G1_HAL_006.clustS.gz') 2016-10-03 10:01:38,523 pid=4262 [jointestimate.py] ERROR sample CCG_06-G1_HAL_049 did not finish 2016-10-03 10:01:38,526 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CCG_06-G1_HAL_049.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CCG_06-G1_HAL_049.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CCG_06-G1_HAL_049.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CCG_06-G1_HAL_049.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CCG_06-G1_HAL_049.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CCG_06-G1_HAL_049.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CCG_06-G1_HAL_049.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CCG_06-G1_HAL_049.clustS.gz') 2016-10-03 10:01:38,529 pid=4262 [jointestimate.py] ERROR sample ENR_03-F_HAL_411 did not finish 2016-10-03 10:01:38,530 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ENR_03-F_HAL_411.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ENR_03-F_HAL_411.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ENR_03-F_HAL_411.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ENR_03-F_HAL_411.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ENR_03-F_HAL_411.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ENR_03-F_HAL_411.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ENR_03-F_HAL_411.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ENR_03-F_HAL_411.clustS.gz') 2016-10-03 10:01:38,531 pid=4262 [jointestimate.py] ERROR sample MOR_01_F_HAL_519 did not finish 2016-10-03 10:01:38,531 pid=4262 [jointestimate.py] ERROR sample PAB_01_F_FIL_645 did not finish 2016-10-03 10:01:38,531 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/PAB_01_F_FIL_645.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/PAB_01_F_FIL_645.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/PAB_01_F_FIL_645.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/PAB_01_F_FIL_645.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/PAB_01_F_FIL_645.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/PAB_01_F_FIL_645.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/PAB_01_F_FIL_645.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/PAB_01_F_FIL_645.clustS.gz') 2016-10-03 10:01:38,531 pid=4262 [jointestimate.py] ERROR sample SAN_09A-G3_HAL_281 did not finish 2016-10-03 10:01:38,531 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SAN_09A-G3_HAL_281.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SAN_09A-G3_HAL_281.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SAN_09A-G3_HAL_281.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SAN_09A-G3_HAL_281.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SAN_09A-G3_HAL_281.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SAN_09A-G3_HAL_281.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SAN_09A-G3_HAL_281.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SAN_09A-G3_HAL_281.clustS.gz') 2016-10-03 10:01:38,533 pid=4262 [jointestimate.py] ERROR sample SAP_04_F_HAL_595 did not finish 2016-10-03 10:01:38,533 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SAP_04_F_HAL_595.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SAP_04_F_HAL_595.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SAP_04_F_HAL_595.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SAP_04_F_HAL_595.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SAP_04_F_HAL_595.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SAP_04_F_HAL_595.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SAP_04_F_HAL_595.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SAP_04_F_HAL_595.clustS.gz') 2016-10-03 10:01:38,535 pid=4262 [jointestimate.py] ERROR sample BSP_01-F_HAL_420 did not finish 2016-10-03 10:01:38,535 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/BSP_01-F_HAL_420.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/BSP_01-F_HAL_420.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/BSP_01-F_HAL_420.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/BSP_01-F_HAL_420.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/BSP_01-F_HAL_420.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/BSP_01-F_HAL_420.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/BSP_01-F_HAL_420.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/BSP_01-F_HAL_420.clustS.gz') 2016-10-03 10:01:38,536 pid=4262 [jointestimate.py] ERROR sample SVN_05-F_HAL_367 did not finish 2016-10-03 10:01:38,536 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SVN_05-F_HAL_367.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SVN_05-F_HAL_367.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SVN_05-F_HAL_367.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SVN_05-F_HAL_367.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SVN_05-F_HAL_367.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SVN_05-F_HAL_367.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SVN_05-F_HAL_367.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SVN_05-F_HAL_367.clustS.gz') 2016-10-03 10:01:38,537 pid=4262 [jointestimate.py] ERROR sample PRT_04-F_HAL_274 did not finish 2016-10-03 10:01:38,537 pid=4262 [jointestimate.py] ERROR sample LME_06-G1_HAL_206 did not finish 2016-10-03 10:01:38,537 pid=4262 [jointestimate.py] ERROR sample GIL_12-F_HAL_158 did not finish 2016-10-03 10:01:38,537 pid=4262 [jointestimate.py] ERROR sample LAR_03-F_FIL_466 did not finish 2016-10-03 10:01:38,537 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/LAR_03-F_FIL_466.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/LAR_03-F_FIL_466.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/LAR_03-F_FIL_466.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/LAR_03-F_FIL_466.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/LAR_03-F_FIL_466.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/LAR_03-F_FIL_466.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/LAR_03-F_FIL_466.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/LAR_03-F_FIL_466.clustS.gz') 2016-10-03 10:01:38,538 pid=4262 [jointestimate.py] ERROR sample POI_03-G3_HAL_269 did not finish 2016-10-03 10:01:38,538 pid=4262 [jointestimate.py] ERROR sample PAJ_17A-G3_HAL_224 did not finish 2016-10-03 10:01:38,538 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PAJ_17A-G3_HAL_224.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PAJ_17A-G3_HAL_224.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PAJ_17A-G3_HAL_224.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PAJ_17A-G3_HAL_224.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PAJ_17A-G3_HAL_224.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PAJ_17A-G3_HAL_224.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PAJ_17A-G3_HAL_224.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PAJ_17A-G3_HAL_224.clustS.gz') 2016-10-03 10:01:38,540 pid=4262 [jointestimate.py] ERROR sample EDW_11_F_HAL_805 did not finish 2016-10-03 10:01:38,540 pid=4262 [jointestimate.py] ERROR sample CNF_02-G1_HAL_085 did not finish 2016-10-03 10:01:38,541 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CNF_02-G1_HAL_085.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CNF_02-G1_HAL_085.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CNF_02-G1_HAL_085.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CNF_02-G1_HAL_085.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CNF_02-G1_HAL_085.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CNF_02-G1_HAL_085.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CNF_02-G1_HAL_085.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CNF_02-G1_HAL_085.clustS.gz') 2016-10-03 10:01:38,541 pid=4262 [jointestimate.py] ERROR sample GNF_01-F_FIL_171 did not finish 2016-10-03 10:01:38,541 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNF_01-F_FIL_171.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNF_01-F_FIL_171.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNF_01-F_FIL_171.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNF_01-F_FIL_171.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNF_01-F_FIL_171.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNF_01-F_FIL_171.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNF_01-F_FIL_171.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNF_01-F_FIL_171.clustS.gz') 2016-10-03 10:01:38,541 pid=4262 [jointestimate.py] ERROR sample GMO_06-F_HAL_408 did not finish 2016-10-03 10:01:38,542 pid=4262 [jointestimate.py] ERROR sample DSO_05_F_HAL_682 did not finish 2016-10-03 10:01:38,542 pid=4262 [jointestimate.py] ERROR sample CRC_03-G1_HAL_109 did not finish 2016-10-03 10:01:38,542 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CRC_03-G1_HAL_109.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CRC_03-G1_HAL_109.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CRC_03-G1_HAL_109.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CRC_03-G1_HAL_109.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CRC_03-G1_HAL_109.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CRC_03-G1_HAL_109.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CRC_03-G1_HAL_109.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CRC_03-G1_HAL_109.clustS.gz') 2016-10-03 10:01:38,542 pid=4262 [jointestimate.py] ERROR sample KEN_03_F_HAL_767 did not finish 2016-10-03 10:01:38,542 pid=4262 [jointestimate.py] ERROR sample PDL_04-F_HAL_259 did not finish 2016-10-03 10:01:38,543 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PDL_04-F_HAL_259.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PDL_04-F_HAL_259.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PDL_04-F_HAL_259.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PDL_04-F_HAL_259.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PDL_04-F_HAL_259.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PDL_04-F_HAL_259.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PDL_04-F_HAL_259.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PDL_04-F_HAL_259.clustS.gz') 2016-10-03 10:01:38,543 pid=4262 [jointestimate.py] ERROR sample PDK_02-F_HAL_258 did not finish 2016-10-03 10:01:38,543 pid=4262 [jointestimate.py] ERROR sample HAY_03_F_HAL_861 did not finish 2016-10-03 10:01:38,543 pid=4262 [jointestimate.py] ERROR sample BOS_03_F_HAL_677 did not finish 2016-10-03 10:01:38,543 pid=4262 [jointestimate.py] ERROR sample STW_09-G1_HAL_359 did not finish 2016-10-03 10:01:38,544 pid=4262 [jointestimate.py] ERROR sample SVN_09-F_HAL_370 did not finish 2016-10-03 10:01:38,544 pid=4262 [jointestimate.py] ERROR sample ELG_50-G1_HAL_135 did not finish 2016-10-03 10:01:38,544 pid=4262 [jointestimate.py] ERROR sample ATO_01_F_HAL_553 did not finish 2016-10-03 10:01:38,544 pid=4262 [jointestimate.py] ERROR sample EDW_28_F_HAL_811 did not finish 2016-10-03 10:01:38,545 pid=4262 [jointestimate.py] ERROR sample EDW_15_F_HAL_808 did not finish 2016-10-03 10:01:38,545 pid=4262 [jointestimate.py] ERROR sample SLS_07-G1_HAL_313 did not finish 2016-10-03 10:01:38,545 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SLS_07-G1_HAL_313.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SLS_07-G1_HAL_313.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SLS_07-G1_HAL_313.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SLS_07-G1_HAL_313.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SLS_07-G1_HAL_313.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SLS_07-G1_HAL_313.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SLS_07-G1_HAL_313.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SLS_07-G1_HAL_313.clustS.gz') 2016-10-03 10:01:38,545 pid=4262 [jointestimate.py] ERROR sample THC_07_F_HAL_884 did not finish 2016-10-03 10:01:38,545 pid=4262 [jointestimate.py] ERROR sample REA_05_F_HAL_798 did not finish 2016-10-03 10:01:38,546 pid=4262 [jointestimate.py] ERROR sample BBD_15_F_HAL_633 did not finish 2016-10-03 10:01:38,546 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/BBD_15_F_HAL_633.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/BBD_15_F_HAL_633.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/BBD_15_F_HAL_633.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/BBD_15_F_HAL_633.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/BBD_15_F_HAL_633.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/BBD_15_F_HAL_633.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/BBD_15_F_HAL_633.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/BBD_15_F_HAL_633.clustS.gz') 2016-10-03 10:01:38,546 pid=4262 [jointestimate.py] ERROR sample HTE_02_F_HAL_514 did not finish 2016-10-03 10:01:38,546 pid=4262 [jointestimate.py] ERROR sample HTE_01_F_HAL_513 did not finish 2016-10-03 10:01:38,546 pid=4262 [jointestimate.py] ERROR sample GIL_11-G1_HAL_157 did not finish 2016-10-03 10:01:38,547 pid=4262 [jointestimate.py] ERROR sample MEZ_09_F_HAL_568 did not finish 2016-10-03 10:01:38,547 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MEZ_09_F_HAL_568.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MEZ_09_F_HAL_568.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MEZ_09_F_HAL_568.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MEZ_09_F_HAL_568.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MEZ_09_F_HAL_568.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MEZ_09_F_HAL_568.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MEZ_09_F_HAL_568.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MEZ_09_F_HAL_568.clustS.gz') 2016-10-03 10:01:38,547 pid=4262 [jointestimate.py] ERROR sample LME_05-G2_HAL_205 did not finish 2016-10-03 10:01:38,547 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LME_05-G2_HAL_205.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LME_05-G2_HAL_205.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LME_05-G2_HAL_205.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LME_05-G2_HAL_205.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LME_05-G2_HAL_205.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LME_05-G2_HAL_205.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LME_05-G2_HAL_205.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LME_05-G2_HAL_205.clustS.gz') 2016-10-03 10:01:38,547 pid=4262 [jointestimate.py] ERROR sample TNK_01-F_HAL_372 did not finish 2016-10-03 10:01:38,549 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TNK_01-F_HAL_372.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TNK_01-F_HAL_372.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TNK_01-F_HAL_372.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TNK_01-F_HAL_372.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TNK_01-F_HAL_372.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TNK_01-F_HAL_372.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TNK_01-F_HAL_372.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TNK_01-F_HAL_372.clustS.gz') 2016-10-03 10:01:38,550 pid=4262 [jointestimate.py] ERROR sample NDD_03_F_HAL_597 did not finish 2016-10-03 10:01:38,550 pid=4262 [jointestimate.py] ERROR sample REA_06_F_HAL_801 did not finish 2016-10-03 10:01:38,550 pid=4262 [jointestimate.py] ERROR sample DRS_04-F_HAL_478 did not finish 2016-10-03 10:01:38,551 pid=4262 [jointestimate.py] ERROR sample COR_22-G1_HAL_106 did not finish 2016-10-03 10:01:38,551 pid=4262 [jointestimate.py] ERROR sample SVN_03-G1_HAL_365 did not finish 2016-10-03 10:01:38,551 pid=4262 [jointestimate.py] ERROR sample SEP_07-F_HAL_475 did not finish 2016-10-03 10:01:38,551 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SEP_07-F_HAL_475.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SEP_07-F_HAL_475.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SEP_07-F_HAL_475.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SEP_07-F_HAL_475.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SEP_07-F_HAL_475.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SEP_07-F_HAL_475.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SEP_07-F_HAL_475.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SEP_07-F_HAL_475.clustS.gz') 2016-10-03 10:01:38,551 pid=4262 [jointestimate.py] ERROR sample MCR_53-F_HAL_215 did not finish 2016-10-03 10:01:38,552 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MCR_53-F_HAL_215.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MCR_53-F_HAL_215.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MCR_53-F_HAL_215.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MCR_53-F_HAL_215.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MCR_53-F_HAL_215.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MCR_53-F_HAL_215.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MCR_53-F_HAL_215.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/MCR_53-F_HAL_215.clustS.gz') 2016-10-03 10:01:38,552 pid=4262 [jointestimate.py] ERROR sample PCR_53-G1_HAL_237 did not finish 2016-10-03 10:01:38,552 pid=4262 [jointestimate.py] ERROR sample PDB_08-F_HAL_249 did not finish 2016-10-03 10:01:38,552 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDB_08-F_HAL_249.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDB_08-F_HAL_249.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDB_08-F_HAL_249.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDB_08-F_HAL_249.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDB_08-F_HAL_249.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDB_08-F_HAL_249.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDB_08-F_HAL_249.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDB_08-F_HAL_249.clustS.gz') 2016-10-03 10:01:38,552 pid=4262 [jointestimate.py] ERROR sample ZAF_01-F_FIL_462 did not finish 2016-10-03 10:01:38,553 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ZAF_01-F_FIL_462.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ZAF_01-F_FIL_462.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ZAF_01-F_FIL_462.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ZAF_01-F_FIL_462.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ZAF_01-F_FIL_462.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ZAF_01-F_FIL_462.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ZAF_01-F_FIL_462.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ZAF_01-F_FIL_462.clustS.gz') 2016-10-03 10:01:38,553 pid=4262 [jointestimate.py] ERROR sample GIL_22-G1_HAL_167 did not finish 2016-10-03 10:01:38,553 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GIL_22-G1_HAL_167.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GIL_22-G1_HAL_167.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GIL_22-G1_HAL_167.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GIL_22-G1_HAL_167.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GIL_22-G1_HAL_167.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GIL_22-G1_HAL_167.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GIL_22-G1_HAL_167.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GIL_22-G1_HAL_167.clustS.gz') 2016-10-03 10:01:38,553 pid=4262 [jointestimate.py] ERROR sample MCR_20-G1_HAL_213 did not finish 2016-10-03 10:01:38,554 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MCR_20-G1_HAL_213.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MCR_20-G1_HAL_213.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MCR_20-G1_HAL_213.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MCR_20-G1_HAL_213.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MCR_20-G1_HAL_213.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MCR_20-G1_HAL_213.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MCR_20-G1_HAL_213.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MCR_20-G1_HAL_213.clustS.gz') 2016-10-03 10:01:38,554 pid=4262 [jointestimate.py] ERROR sample SEV_25-F_HAL_306 did not finish 2016-10-03 10:01:38,554 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEV_25-F_HAL_306.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEV_25-F_HAL_306.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEV_25-F_HAL_306.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEV_25-F_HAL_306.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEV_25-F_HAL_306.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEV_25-F_HAL_306.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEV_25-F_HAL_306.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEV_25-F_HAL_306.clustS.gz') 2016-10-03 10:01:38,554 pid=4262 [jointestimate.py] ERROR sample TWC_02_F_HAL_662 did not finish 2016-10-03 10:01:38,554 pid=4262 [jointestimate.py] ERROR sample FIL_06-F_FIL_439 did not finish 2016-10-03 10:01:38,555 pid=4262 [jointestimate.py] ERROR sample MAP_03_F_HAL_577 did not finish 2016-10-03 10:01:38,555 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/MAP_03_F_HAL_577.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/MAP_03_F_HAL_577.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/MAP_03_F_HAL_577.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/MAP_03_F_HAL_577.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/MAP_03_F_HAL_577.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/MAP_03_F_HAL_577.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/MAP_03_F_HAL_577.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/MAP_03_F_HAL_577.clustS.gz') 2016-10-03 10:01:38,555 pid=4262 [jointestimate.py] ERROR sample ATO_05_F_HAL_557 did not finish 2016-10-03 10:01:38,555 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ATO_05_F_HAL_557.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ATO_05_F_HAL_557.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ATO_05_F_HAL_557.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ATO_05_F_HAL_557.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ATO_05_F_HAL_557.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ATO_05_F_HAL_557.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ATO_05_F_HAL_557.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ATO_05_F_HAL_557.clustS.gz') 2016-10-03 10:01:38,556 pid=4262 [jointestimate.py] ERROR sample HUA_04_F_HAL_528 did not finish 2016-10-03 10:01:38,556 pid=4262 [jointestimate.py] ERROR sample MEZ_03_F_HAL_562 did not finish 2016-10-03 10:01:38,556 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MEZ_03_F_HAL_562.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MEZ_03_F_HAL_562.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MEZ_03_F_HAL_562.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MEZ_03_F_HAL_562.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MEZ_03_F_HAL_562.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MEZ_03_F_HAL_562.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MEZ_03_F_HAL_562.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MEZ_03_F_HAL_562.clustS.gz') 2016-10-03 10:01:38,556 pid=4262 [jointestimate.py] ERROR sample ATO_03_F_HAL_555 did not finish 2016-10-03 10:01:38,556 pid=4262 [jointestimate.py] ERROR sample HAY_06_F_HAL_864 did not finish 2016-10-03 10:01:38,557 pid=4262 [jointestimate.py] ERROR sample GIL_20-G1_HAL_165 did not finish 2016-10-03 10:01:38,557 pid=4262 [jointestimate.py] ERROR sample HUA_02_F_HAL_526 did not finish 2016-10-03 10:01:38,557 pid=4262 [jointestimate.py] ERROR sample CHA_08-G1_HAL_065 did not finish 2016-10-03 10:01:38,557 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CHA_08-G1_HAL_065.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CHA_08-G1_HAL_065.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CHA_08-G1_HAL_065.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CHA_08-G1_HAL_065.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CHA_08-G1_HAL_065.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CHA_08-G1_HAL_065.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CHA_08-G1_HAL_065.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CHA_08-G1_HAL_065.clustS.gz') 2016-10-03 10:01:38,557 pid=4262 [jointestimate.py] ERROR sample NDD_07_F_HAL_600 did not finish 2016-10-03 10:01:38,558 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/NDD_07_F_HAL_600.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/NDD_07_F_HAL_600.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/NDD_07_F_HAL_600.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/NDD_07_F_HAL_600.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/NDD_07_F_HAL_600.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/NDD_07_F_HAL_600.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/NDD_07_F_HAL_600.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/NDD_07_F_HAL_600.clustS.gz') 2016-10-03 10:01:38,558 pid=4262 [jointestimate.py] ERROR sample ATO_06_F_HAL_558 did not finish 2016-10-03 10:01:38,558 pid=4262 [jointestimate.py] ERROR sample SOM_02_F_HAL_653 did not finish 2016-10-03 10:01:38,558 pid=4262 [jointestimate.py] ERROR sample STW_08-G1_HAL_358 did not finish 2016-10-03 10:01:38,559 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/STW_08-G1_HAL_358.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/STW_08-G1_HAL_358.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/STW_08-G1_HAL_358.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/STW_08-G1_HAL_358.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/STW_08-G1_HAL_358.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/STW_08-G1_HAL_358.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/STW_08-G1_HAL_358.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/STW_08-G1_HAL_358.clustS.gz') 2016-10-03 10:01:38,559 pid=4262 [jointestimate.py] ERROR sample BOS_04_F_HAL_684 did not finish 2016-10-03 10:01:38,559 pid=4262 [jointestimate.py] ERROR sample ZAP_01-F_FIL_451 did not finish 2016-10-03 10:01:38,559 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ZAP_01-F_FIL_451.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ZAP_01-F_FIL_451.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ZAP_01-F_FIL_451.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ZAP_01-F_FIL_451.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ZAP_01-F_FIL_451.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ZAP_01-F_FIL_451.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ZAP_01-F_FIL_451.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ZAP_01-F_FIL_451.clustS.gz') 2016-10-03 10:01:38,559 pid=4262 [jointestimate.py] ERROR sample ATC_16_F_FIL_838 did not finish 2016-10-03 10:01:38,560 pid=4262 [jointestimate.py] ERROR sample MAP_06_F_HAL_580 did not finish 2016-10-03 10:01:38,560 pid=4262 [jointestimate.py] ERROR sample BEL_22_F_HAL_673 did not finish 2016-10-03 10:01:38,560 pid=4262 [jointestimate.py] ERROR sample CRS_03-F_HAL_423 did not finish 2016-10-03 10:01:38,561 pid=4262 [jointestimate.py] ERROR sample SEV_02-G1_HAL_289 did not finish 2016-10-03 10:01:38,561 pid=4262 [jointestimate.py] ERROR sample SEM_01-G1_HAL_284 did not finish 2016-10-03 10:01:38,561 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEM_01-G1_HAL_284.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEM_01-G1_HAL_284.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEM_01-G1_HAL_284.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEM_01-G1_HAL_284.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEM_01-G1_HAL_284.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEM_01-G1_HAL_284.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEM_01-G1_HAL_284.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEM_01-G1_HAL_284.clustS.gz') 2016-10-03 10:01:38,561 pid=4262 [jointestimate.py] ERROR sample SEV_10-F_HAL_297 did not finish 2016-10-03 10:01:38,561 pid=4262 [jointestimate.py] ERROR sample ABI_01-G2_HAL_001 did not finish 2016-10-03 10:01:38,562 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ABI_01-G2_HAL_001.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ABI_01-G2_HAL_001.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ABI_01-G2_HAL_001.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ABI_01-G2_HAL_001.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ABI_01-G2_HAL_001.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ABI_01-G2_HAL_001.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ABI_01-G2_HAL_001.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ABI_01-G2_HAL_001.clustS.gz') 2016-10-03 10:01:38,562 pid=4262 [jointestimate.py] ERROR sample RAR_08_F_HAL_898 did not finish 2016-10-03 10:01:38,562 pid=4262 [jointestimate.py] ERROR sample CRS_04-F_HAL_424 did not finish 2016-10-03 10:01:38,562 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CRS_04-F_HAL_424.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CRS_04-F_HAL_424.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CRS_04-F_HAL_424.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CRS_04-F_HAL_424.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CRS_04-F_HAL_424.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CRS_04-F_HAL_424.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CRS_04-F_HAL_424.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CRS_04-F_HAL_424.clustS.gz') 2016-10-03 10:01:38,563 pid=4262 [jointestimate.py] ERROR sample KER_06_F_HAL_756 did not finish 2016-10-03 10:01:38,563 pid=4262 [jointestimate.py] ERROR sample SEV_23-F_HAL_304 did not finish 2016-10-03 10:01:38,563 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_23-F_HAL_304.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_23-F_HAL_304.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_23-F_HAL_304.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_23-F_HAL_304.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_23-F_HAL_304.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_23-F_HAL_304.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_23-F_HAL_304.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_23-F_HAL_304.clustS.gz') 2016-10-03 10:01:38,563 pid=4262 [jointestimate.py] ERROR sample STW_02-G1_HAL_355 did not finish 2016-10-03 10:01:38,564 pid=4262 [jointestimate.py] ERROR sample HAR_04_F_FIL_712 did not finish 2016-10-03 10:01:38,564 pid=4262 [jointestimate.py] ERROR sample TLA_06_F_HAL_574 did not finish 2016-10-03 10:01:38,565 pid=4262 [jointestimate.py] ERROR sample ALI_02-G1_HAL_005 did not finish 2016-10-03 10:01:38,565 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ALI_02-G1_HAL_005.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ALI_02-G1_HAL_005.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ALI_02-G1_HAL_005.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ALI_02-G1_HAL_005.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ALI_02-G1_HAL_005.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ALI_02-G1_HAL_005.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ALI_02-G1_HAL_005.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ALI_02-G1_HAL_005.clustS.gz') 2016-10-03 10:01:38,565 pid=4262 [jointestimate.py] ERROR sample STW_07-G1_HAL_357 did not finish 2016-10-03 10:01:38,565 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/STW_07-G1_HAL_357.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/STW_07-G1_HAL_357.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/STW_07-G1_HAL_357.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/STW_07-G1_HAL_357.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/STW_07-G1_HAL_357.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/STW_07-G1_HAL_357.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/STW_07-G1_HAL_357.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/STW_07-G1_HAL_357.clustS.gz') 2016-10-03 10:01:38,566 pid=4262 [jointestimate.py] ERROR sample BUR_03_F_HAL_670 did not finish 2016-10-03 10:01:38,566 pid=4262 [jointestimate.py] ERROR sample COR_12-G1_HAL_098 did not finish 2016-10-03 10:01:38,567 pid=4262 [jointestimate.py] ERROR sample MEZ_05_F_HAL_564 did not finish 2016-10-03 10:01:38,567 pid=4262 [jointestimate.py] ERROR sample CLD_02-G1_HAL_078 did not finish 2016-10-03 10:01:38,568 pid=4262 [jointestimate.py] ERROR sample HAY_02_F_HAL_860 did not finish 2016-10-03 10:01:38,568 pid=4262 [jointestimate.py] ERROR sample GMO_03-F_HAL_405 did not finish 2016-10-03 10:01:38,568 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GMO_03-F_HAL_405.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GMO_03-F_HAL_405.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GMO_03-F_HAL_405.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GMO_03-F_HAL_405.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GMO_03-F_HAL_405.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GMO_03-F_HAL_405.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GMO_03-F_HAL_405.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GMO_03-F_HAL_405.clustS.gz') 2016-10-03 10:01:38,568 pid=4262 [jointestimate.py] ERROR sample TLA_02_F_HAL_570 did not finish 2016-10-03 10:01:38,569 pid=4262 [jointestimate.py] ERROR sample BOS_09_F_HAL_647 did not finish 2016-10-03 10:01:38,569 pid=4262 [jointestimate.py] ERROR sample SLR_01_F_HAL_624 did not finish 2016-10-03 10:01:38,569 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SLR_01_F_HAL_624.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SLR_01_F_HAL_624.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SLR_01_F_HAL_624.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SLR_01_F_HAL_624.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SLR_01_F_HAL_624.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SLR_01_F_HAL_624.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SLR_01_F_HAL_624.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SLR_01_F_HAL_624.clustS.gz') 2016-10-03 10:01:38,569 pid=4262 [jointestimate.py] ERROR sample ATA_01-F_FIL_464 did not finish 2016-10-03 10:01:38,569 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ATA_01-F_FIL_464.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ATA_01-F_FIL_464.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ATA_01-F_FIL_464.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ATA_01-F_FIL_464.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ATA_01-F_FIL_464.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ATA_01-F_FIL_464.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ATA_01-F_FIL_464.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ATA_01-F_FIL_464.clustS.gz') 2016-10-03 10:01:38,570 pid=4262 [jointestimate.py] ERROR sample TNK_03-F_HAL_374 did not finish 2016-10-03 10:01:38,570 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TNK_03-F_HAL_374.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TNK_03-F_HAL_374.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TNK_03-F_HAL_374.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TNK_03-F_HAL_374.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TNK_03-F_HAL_374.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TNK_03-F_HAL_374.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TNK_03-F_HAL_374.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TNK_03-F_HAL_374.clustS.gz') 2016-10-03 10:01:38,570 pid=4262 [jointestimate.py] ERROR sample SEV_12-F_HAL_298 did not finish 2016-10-03 10:01:38,571 pid=4262 [jointestimate.py] ERROR sample GIL_24-F_HAL_169 did not finish 2016-10-03 10:01:38,571 pid=4262 [jointestimate.py] ERROR sample PIN_02-G1_HAL_267 did not finish 2016-10-03 10:01:38,574 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PIN_02-G1_HAL_267.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PIN_02-G1_HAL_267.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PIN_02-G1_HAL_267.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PIN_02-G1_HAL_267.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PIN_02-G1_HAL_267.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PIN_02-G1_HAL_267.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PIN_02-G1_HAL_267.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PIN_02-G1_HAL_267.clustS.gz') 2016-10-03 10:01:38,574 pid=4262 [jointestimate.py] ERROR sample SOM_01_F_HAL_652 did not finish 2016-10-03 10:01:38,574 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SOM_01_F_HAL_652.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SOM_01_F_HAL_652.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SOM_01_F_HAL_652.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SOM_01_F_HAL_652.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SOM_01_F_HAL_652.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SOM_01_F_HAL_652.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SOM_01_F_HAL_652.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SOM_01_F_HAL_652.clustS.gz') 2016-10-03 10:01:38,575 pid=4262 [jointestimate.py] ERROR sample SNO_01-G1_HAL_319 did not finish 2016-10-03 10:01:38,575 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_01-G1_HAL_319.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_01-G1_HAL_319.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_01-G1_HAL_319.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_01-G1_HAL_319.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_01-G1_HAL_319.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_01-G1_HAL_319.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_01-G1_HAL_319.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_01-G1_HAL_319.clustS.gz') 2016-10-03 10:01:38,575 pid=4262 [jointestimate.py] ERROR sample PRT_55-G1_HAL_277 did not finish 2016-10-03 10:01:38,576 pid=4262 [jointestimate.py] ERROR sample SEV_29-F_HAL_309 did not finish 2016-10-03 10:01:38,576 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_29-F_HAL_309.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_29-F_HAL_309.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_29-F_HAL_309.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_29-F_HAL_309.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_29-F_HAL_309.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_29-F_HAL_309.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_29-F_HAL_309.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_29-F_HAL_309.clustS.gz') 2016-10-03 10:01:38,577 pid=4262 [jointestimate.py] ERROR sample SMT_06-G2_HAL_318 did not finish 2016-10-03 10:01:38,577 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SMT_06-G2_HAL_318.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SMT_06-G2_HAL_318.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SMT_06-G2_HAL_318.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SMT_06-G2_HAL_318.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SMT_06-G2_HAL_318.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SMT_06-G2_HAL_318.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SMT_06-G2_HAL_318.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SMT_06-G2_HAL_318.clustS.gz') 2016-10-03 10:01:38,577 pid=4262 [jointestimate.py] ERROR sample CLD_06-G1_HAL_082 did not finish 2016-10-03 10:01:38,577 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CLD_06-G1_HAL_082.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CLD_06-G1_HAL_082.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CLD_06-G1_HAL_082.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CLD_06-G1_HAL_082.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CLD_06-G1_HAL_082.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CLD_06-G1_HAL_082.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CLD_06-G1_HAL_082.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CLD_06-G1_HAL_082.clustS.gz') 2016-10-03 10:01:38,578 pid=4262 [jointestimate.py] ERROR sample CDM_04_F_HAL_587 did not finish 2016-10-03 10:01:38,578 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CDM_04_F_HAL_587.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CDM_04_F_HAL_587.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CDM_04_F_HAL_587.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CDM_04_F_HAL_587.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CDM_04_F_HAL_587.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CDM_04_F_HAL_587.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CDM_04_F_HAL_587.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CDM_04_F_HAL_587.clustS.gz') 2016-10-03 10:01:38,578 pid=4262 [jointestimate.py] ERROR sample MCR_54-F_HAL_216 did not finish 2016-10-03 10:01:38,578 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/MCR_54-F_HAL_216.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/MCR_54-F_HAL_216.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/MCR_54-F_HAL_216.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/MCR_54-F_HAL_216.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/MCR_54-F_HAL_216.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/MCR_54-F_HAL_216.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/MCR_54-F_HAL_216.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/MCR_54-F_HAL_216.clustS.gz') 2016-10-03 10:01:38,578 pid=4262 [jointestimate.py] ERROR sample CCO_02-F_HAL_056 did not finish 2016-10-03 10:01:38,579 pid=4262 [jointestimate.py] ERROR sample SVN_01-F_HAL_363 did not finish 2016-10-03 10:01:38,579 pid=4262 [jointestimate.py] ERROR sample STW_12-G3_HAL_361 did not finish 2016-10-03 10:01:38,579 pid=4262 [jointestimate.py] ERROR sample SVN_10-F_HAL_371 did not finish 2016-10-03 10:01:38,579 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SVN_10-F_HAL_371.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SVN_10-F_HAL_371.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SVN_10-F_HAL_371.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SVN_10-F_HAL_371.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SVN_10-F_HAL_371.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SVN_10-F_HAL_371.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SVN_10-F_HAL_371.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SVN_10-F_HAL_371.clustS.gz') 2016-10-03 10:01:38,579 pid=4262 [jointestimate.py] ERROR sample SNO_05-F_HAL_320 did not finish 2016-10-03 10:01:38,580 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SNO_05-F_HAL_320.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SNO_05-F_HAL_320.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SNO_05-F_HAL_320.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SNO_05-F_HAL_320.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SNO_05-F_HAL_320.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SNO_05-F_HAL_320.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SNO_05-F_HAL_320.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SNO_05-F_HAL_320.clustS.gz') 2016-10-03 10:01:38,580 pid=4262 [jointestimate.py] ERROR sample SEV_20-F_HAL_301 did not finish 2016-10-03 10:01:38,580 pid=4262 [jointestimate.py] ERROR sample PDB_07-G1_HAL_247 did not finish 2016-10-03 10:01:38,581 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PDB_07-G1_HAL_247.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PDB_07-G1_HAL_247.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PDB_07-G1_HAL_247.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PDB_07-G1_HAL_247.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PDB_07-G1_HAL_247.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PDB_07-G1_HAL_247.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PDB_07-G1_HAL_247.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PDB_07-G1_HAL_247.clustS.gz') 2016-10-03 10:01:38,581 pid=4262 [jointestimate.py] ERROR sample NDD_05_F_HAL_598 did not finish 2016-10-03 10:01:38,581 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/NDD_05_F_HAL_598.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/NDD_05_F_HAL_598.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/NDD_05_F_HAL_598.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/NDD_05_F_HAL_598.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/NDD_05_F_HAL_598.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/NDD_05_F_HAL_598.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/NDD_05_F_HAL_598.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/NDD_05_F_HAL_598.clustS.gz') 2016-10-03 10:01:38,581 pid=4262 [jointestimate.py] ERROR sample TEM_07_F_HAL_503 did not finish 2016-10-03 10:01:38,582 pid=4262 [jointestimate.py] ERROR sample SEM_02A-G2_HAL_286 did not finish 2016-10-03 10:01:38,582 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SEM_02A-G2_HAL_286.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SEM_02A-G2_HAL_286.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SEM_02A-G2_HAL_286.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SEM_02A-G2_HAL_286.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SEM_02A-G2_HAL_286.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SEM_02A-G2_HAL_286.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SEM_02A-G2_HAL_286.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SEM_02A-G2_HAL_286.clustS.gz') 2016-10-03 10:01:38,582 pid=4262 [jointestimate.py] ERROR sample PDS_01-F_HAL_261 did not finish 2016-10-03 10:01:38,582 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PDS_01-F_HAL_261.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PDS_01-F_HAL_261.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PDS_01-F_HAL_261.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PDS_01-F_HAL_261.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PDS_01-F_HAL_261.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PDS_01-F_HAL_261.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PDS_01-F_HAL_261.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PDS_01-F_HAL_261.clustS.gz') 2016-10-03 10:01:38,582 pid=4262 [jointestimate.py] ERROR sample KEN_01_F_HAL_772 did not finish 2016-10-03 10:01:38,583 pid=4262 [jointestimate.py] ERROR sample PDB_09-F_HAL_250 did not finish 2016-10-03 10:01:38,584 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDB_09-F_HAL_250.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDB_09-F_HAL_250.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDB_09-F_HAL_250.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDB_09-F_HAL_250.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDB_09-F_HAL_250.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDB_09-F_HAL_250.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDB_09-F_HAL_250.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDB_09-F_HAL_250.clustS.gz') 2016-10-03 10:01:38,587 pid=4262 [jointestimate.py] ERROR sample BBD_08_F_HAL_629 did not finish 2016-10-03 10:01:38,587 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/BBD_08_F_HAL_629.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/BBD_08_F_HAL_629.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/BBD_08_F_HAL_629.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/BBD_08_F_HAL_629.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/BBD_08_F_HAL_629.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/BBD_08_F_HAL_629.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/BBD_08_F_HAL_629.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/BBD_08_F_HAL_629.clustS.gz') 2016-10-03 10:01:38,588 pid=4262 [jointestimate.py] ERROR sample SEV_28-F_HAL_308 did not finish 2016-10-03 10:01:38,588 pid=4262 [jointestimate.py] ERROR sample CDM_05_F_HAL_588 did not finish 2016-10-03 10:01:38,588 pid=4262 [jointestimate.py] ERROR sample SVN_08-F_HAL_369 did not finish 2016-10-03 10:01:38,588 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SVN_08-F_HAL_369.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SVN_08-F_HAL_369.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SVN_08-F_HAL_369.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SVN_08-F_HAL_369.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SVN_08-F_HAL_369.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SVN_08-F_HAL_369.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SVN_08-F_HAL_369.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SVN_08-F_HAL_369.clustS.gz') 2016-10-03 10:01:38,590 pid=4262 [jointestimate.py] ERROR sample MAP_02_F_HAL_576 did not finish 2016-10-03 10:01:38,590 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/MAP_02_F_HAL_576.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/MAP_02_F_HAL_576.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/MAP_02_F_HAL_576.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/MAP_02_F_HAL_576.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/MAP_02_F_HAL_576.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/MAP_02_F_HAL_576.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/MAP_02_F_HAL_576.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/MAP_02_F_HAL_576.clustS.gz') 2016-10-03 10:01:38,590 pid=4262 [jointestimate.py] ERROR sample BEX_15_F_HAL_789 did not finish 2016-10-03 10:01:38,591 pid=4262 [jointestimate.py] ERROR sample SRG_04-F_HAL_398 did not finish 2016-10-03 10:01:38,591 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SRG_04-F_HAL_398.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SRG_04-F_HAL_398.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SRG_04-F_HAL_398.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SRG_04-F_HAL_398.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SRG_04-F_HAL_398.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SRG_04-F_HAL_398.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SRG_04-F_HAL_398.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SRG_04-F_HAL_398.clustS.gz') 2016-10-03 10:01:38,591 pid=4262 [jointestimate.py] ERROR sample TNK_02-G1_HAL_373 did not finish 2016-10-03 10:01:38,591 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/TNK_02-G1_HAL_373.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/TNK_02-G1_HAL_373.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/TNK_02-G1_HAL_373.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/TNK_02-G1_HAL_373.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/TNK_02-G1_HAL_373.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/TNK_02-G1_HAL_373.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/TNK_02-G1_HAL_373.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/TNK_02-G1_HAL_373.clustS.gz') 2016-10-03 10:01:38,591 pid=4262 [jointestimate.py] ERROR sample TLA_03_F_HAL_571 did not finish 2016-10-03 10:01:38,592 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TLA_03_F_HAL_571.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TLA_03_F_HAL_571.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TLA_03_F_HAL_571.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TLA_03_F_HAL_571.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TLA_03_F_HAL_571.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TLA_03_F_HAL_571.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TLA_03_F_HAL_571.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TLA_03_F_HAL_571.clustS.gz') 2016-10-03 10:01:38,592 pid=4262 [jointestimate.py] ERROR sample SEV_18-F_HAL_300 did not finish 2016-10-03 10:01:38,592 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_18-F_HAL_300.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_18-F_HAL_300.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_18-F_HAL_300.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_18-F_HAL_300.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_18-F_HAL_300.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_18-F_HAL_300.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_18-F_HAL_300.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_18-F_HAL_300.clustS.gz') 2016-10-03 10:01:38,592 pid=4262 [jointestimate.py] ERROR sample CRC_02-G1_HAL_108 did not finish 2016-10-03 10:01:38,593 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CRC_02-G1_HAL_108.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CRC_02-G1_HAL_108.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CRC_02-G1_HAL_108.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CRC_02-G1_HAL_108.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CRC_02-G1_HAL_108.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CRC_02-G1_HAL_108.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CRC_02-G1_HAL_108.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CRC_02-G1_HAL_108.clustS.gz') 2016-10-03 10:01:38,593 pid=4262 [jointestimate.py] ERROR sample VIR_DAC06_VIR_468 did not finish 2016-10-03 10:01:38,593 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/VIR_DAC06_VIR_468.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/VIR_DAC06_VIR_468.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/VIR_DAC06_VIR_468.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/VIR_DAC06_VIR_468.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/VIR_DAC06_VIR_468.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/VIR_DAC06_VIR_468.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/VIR_DAC06_VIR_468.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/VIR_DAC06_VIR_468.clustS.gz') 2016-10-03 10:01:38,593 pid=4262 [jointestimate.py] ERROR sample PRT_06-F_HAL_276 did not finish 2016-10-03 10:01:38,593 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PRT_06-F_HAL_276.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PRT_06-F_HAL_276.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PRT_06-F_HAL_276.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PRT_06-F_HAL_276.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PRT_06-F_HAL_276.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PRT_06-F_HAL_276.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PRT_06-F_HAL_276.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PRT_06-F_HAL_276.clustS.gz') 2016-10-03 10:01:38,594 pid=4262 [jointestimate.py] ERROR sample SMF_01-G1_HAL_315 did not finish 2016-10-03 10:01:38,594 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SMF_01-G1_HAL_315.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SMF_01-G1_HAL_315.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SMF_01-G1_HAL_315.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SMF_01-G1_HAL_315.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SMF_01-G1_HAL_315.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SMF_01-G1_HAL_315.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SMF_01-G1_HAL_315.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SMF_01-G1_HAL_315.clustS.gz') 2016-10-03 10:01:38,594 pid=4262 [jointestimate.py] ERROR sample PRT_62-G1_HAL_278 did not finish 2016-10-03 10:01:38,594 pid=4262 [jointestimate.py] ERROR sample CRS_01-F_HAL_421 did not finish 2016-10-03 10:01:38,594 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CRS_01-F_HAL_421.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CRS_01-F_HAL_421.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CRS_01-F_HAL_421.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CRS_01-F_HAL_421.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CRS_01-F_HAL_421.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CRS_01-F_HAL_421.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CRS_01-F_HAL_421.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CRS_01-F_HAL_421.clustS.gz') 2016-10-03 10:01:38,594 pid=4262 [jointestimate.py] ERROR sample DRS_03-F_HAL_477 did not finish 2016-10-03 10:01:38,595 pid=4262 [jointestimate.py] ERROR sample SEV_16-F_HAL_299 did not finish 2016-10-03 10:01:38,595 pid=4262 [jointestimate.py] ERROR sample PDL_05-F_HAL_260 did not finish 2016-10-03 10:01:38,595 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDL_05-F_HAL_260.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDL_05-F_HAL_260.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDL_05-F_HAL_260.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDL_05-F_HAL_260.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDL_05-F_HAL_260.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDL_05-F_HAL_260.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDL_05-F_HAL_260.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDL_05-F_HAL_260.clustS.gz') 2016-10-03 10:01:38,595 pid=4262 [jointestimate.py] ERROR sample MOR_02_F_HAL_520 did not finish 2016-10-03 10:01:38,596 pid=4262 [jointestimate.py] ERROR sample MEZ_01_F_HAL_560 did not finish 2016-10-03 10:01:38,596 pid=4262 [jointestimate.py] ERROR sample CHA_03-G1_HAL_060 did not finish 2016-10-03 10:01:38,596 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_03-G1_HAL_060.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_03-G1_HAL_060.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_03-G1_HAL_060.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_03-G1_HAL_060.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_03-G1_HAL_060.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_03-G1_HAL_060.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_03-G1_HAL_060.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_03-G1_HAL_060.clustS.gz') 2016-10-03 10:01:38,596 pid=4262 [jointestimate.py] ERROR sample PTZ_01_F_HAL_506 did not finish 2016-10-03 10:01:38,597 pid=4262 [jointestimate.py] ERROR sample STW_10-G1_HAL_360 did not finish 2016-10-03 10:01:38,597 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/STW_10-G1_HAL_360.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/STW_10-G1_HAL_360.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/STW_10-G1_HAL_360.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/STW_10-G1_HAL_360.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/STW_10-G1_HAL_360.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/STW_10-G1_HAL_360.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/STW_10-G1_HAL_360.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/STW_10-G1_HAL_360.clustS.gz') 2016-10-03 10:01:38,597 pid=4262 [jointestimate.py] ERROR sample CHA_06-G1_HAL_063 did not finish 2016-10-03 10:01:38,597 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_06-G1_HAL_063.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_06-G1_HAL_063.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_06-G1_HAL_063.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_06-G1_HAL_063.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_06-G1_HAL_063.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_06-G1_HAL_063.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_06-G1_HAL_063.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_06-G1_HAL_063.clustS.gz') 2016-10-03 10:01:38,598 pid=4262 [jointestimate.py] ERROR sample GIL_14-F_HAL_386 did not finish 2016-10-03 10:01:38,598 pid=4262 [jointestimate.py] ERROR sample SNO_08-F_HAL_322 did not finish 2016-10-03 10:01:38,598 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SNO_08-F_HAL_322.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SNO_08-F_HAL_322.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SNO_08-F_HAL_322.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SNO_08-F_HAL_322.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SNO_08-F_HAL_322.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SNO_08-F_HAL_322.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SNO_08-F_HAL_322.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SNO_08-F_HAL_322.clustS.gz') 2016-10-03 10:01:38,598 pid=4262 [jointestimate.py] ERROR sample SAP_03_F_HAL_594 did not finish 2016-10-03 10:01:38,598 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SAP_03_F_HAL_594.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SAP_03_F_HAL_594.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SAP_03_F_HAL_594.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SAP_03_F_HAL_594.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SAP_03_F_HAL_594.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SAP_03_F_HAL_594.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SAP_03_F_HAL_594.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SAP_03_F_HAL_594.clustS.gz') 2016-10-03 10:01:38,599 pid=4262 [jointestimate.py] ERROR sample NDP_02-G2_HAL_219 did not finish 2016-10-03 10:01:38,599 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/NDP_02-G2_HAL_219.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/NDP_02-G2_HAL_219.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/NDP_02-G2_HAL_219.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/NDP_02-G2_HAL_219.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/NDP_02-G2_HAL_219.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/NDP_02-G2_HAL_219.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/NDP_02-G2_HAL_219.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/NDP_02-G2_HAL_219.clustS.gz') 2016-10-03 10:01:38,600 pid=4262 [jointestimate.py] ERROR sample TLA_05_F_HAL_573 did not finish 2016-10-03 10:01:38,601 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/TLA_05_F_HAL_573.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/TLA_05_F_HAL_573.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/TLA_05_F_HAL_573.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/TLA_05_F_HAL_573.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/TLA_05_F_HAL_573.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/TLA_05_F_HAL_573.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/TLA_05_F_HAL_573.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/TLA_05_F_HAL_573.clustS.gz') 2016-10-03 10:01:38,601 pid=4262 [jointestimate.py] ERROR sample PDT_01-F_HAL_425 did not finish 2016-10-03 10:01:38,601 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_01-F_HAL_425.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_01-F_HAL_425.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_01-F_HAL_425.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_01-F_HAL_425.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_01-F_HAL_425.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_01-F_HAL_425.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_01-F_HAL_425.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_01-F_HAL_425.clustS.gz') 2016-10-03 10:01:38,603 pid=4262 [jointestimate.py] ERROR sample SMT_04-G1_HAL_317 did not finish 2016-10-03 10:01:38,603 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SMT_04-G1_HAL_317.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SMT_04-G1_HAL_317.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SMT_04-G1_HAL_317.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SMT_04-G1_HAL_317.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SMT_04-G1_HAL_317.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SMT_04-G1_HAL_317.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SMT_04-G1_HAL_317.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SMT_04-G1_HAL_317.clustS.gz') 2016-10-03 10:01:38,603 pid=4262 [jointestimate.py] ERROR sample UVL_01A_2-G4_HAL_376 did not finish 2016-10-03 10:01:38,604 pid=4262 [jointestimate.py] ERROR sample NDP_05-G1_HAL_220 did not finish 2016-10-03 10:01:38,604 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDP_05-G1_HAL_220.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDP_05-G1_HAL_220.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDP_05-G1_HAL_220.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDP_05-G1_HAL_220.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDP_05-G1_HAL_220.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDP_05-G1_HAL_220.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDP_05-G1_HAL_220.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDP_05-G1_HAL_220.clustS.gz') 2016-10-03 10:01:38,604 pid=4262 [jointestimate.py] ERROR sample SPE_28-F_HAL_338 did not finish 2016-10-03 10:01:38,604 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_28-F_HAL_338.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_28-F_HAL_338.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_28-F_HAL_338.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_28-F_HAL_338.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_28-F_HAL_338.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_28-F_HAL_338.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_28-F_HAL_338.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_28-F_HAL_338.clustS.gz') 2016-10-03 10:01:38,605 pid=4262 [jointestimate.py] ERROR sample SVN_06-F_HAL_368 did not finish 2016-10-03 10:01:38,605 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SVN_06-F_HAL_368.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SVN_06-F_HAL_368.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SVN_06-F_HAL_368.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SVN_06-F_HAL_368.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SVN_06-F_HAL_368.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SVN_06-F_HAL_368.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SVN_06-F_HAL_368.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SVN_06-F_HAL_368.clustS.gz') 2016-10-03 10:01:38,605 pid=4262 [jointestimate.py] ERROR sample COR_04-G1_HAL_093 did not finish 2016-10-03 10:01:38,605 pid=4262 [jointestimate.py] ERROR sample MOR_03_F_HAL_521 did not finish 2016-10-03 10:01:38,606 pid=4262 [jointestimate.py] ERROR sample GNZ_28_2-F_HAL_490 did not finish 2016-10-03 10:01:38,608 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_28_2-F_HAL_490.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_28_2-F_HAL_490.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_28_2-F_HAL_490.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_28_2-F_HAL_490.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_28_2-F_HAL_490.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_28_2-F_HAL_490.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_28_2-F_HAL_490.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_28_2-F_HAL_490.clustS.gz') 2016-10-03 10:01:38,608 pid=4262 [jointestimate.py] ERROR sample TWC_07_F_HAL_671 did not finish 2016-10-03 10:01:38,608 pid=4262 [jointestimate.py] ERROR sample GIL_13-G1_HAL_159 did not finish 2016-10-03 10:01:38,608 pid=4262 [jointestimate.py] ERROR sample BUR_06_F_HAL_665 did not finish 2016-10-03 10:01:38,609 pid=4262 [jointestimate.py] ERROR sample GIL_42A-G3_HAL_170 did not finish 2016-10-03 10:01:38,609 pid=4262 [jointestimate.py] ERROR sample BBF_01_F_HAL_636 did not finish 2016-10-03 10:01:38,609 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BBF_01_F_HAL_636.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BBF_01_F_HAL_636.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BBF_01_F_HAL_636.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BBF_01_F_HAL_636.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BBF_01_F_HAL_636.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BBF_01_F_HAL_636.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BBF_01_F_HAL_636.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BBF_01_F_HAL_636.clustS.gz') 2016-10-03 10:01:38,609 pid=4262 [jointestimate.py] ERROR sample MCR_07-G1_HAL_211 did not finish 2016-10-03 10:01:38,609 pid=4262 [jointestimate.py] ERROR sample BBD_16_F_HAL_634 did not finish 2016-10-03 10:01:38,610 pid=4262 [jointestimate.py] ERROR sample SAN_16-G2_HAL_283 did not finish 2016-10-03 10:01:38,610 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SAN_16-G2_HAL_283.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SAN_16-G2_HAL_283.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SAN_16-G2_HAL_283.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SAN_16-G2_HAL_283.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SAN_16-G2_HAL_283.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SAN_16-G2_HAL_283.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SAN_16-G2_HAL_283.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SAN_16-G2_HAL_283.clustS.gz') 2016-10-03 10:01:38,610 pid=4262 [jointestimate.py] ERROR sample JWE_01-F_FIL_460 did not finish 2016-10-03 10:01:38,610 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/JWE_01-F_FIL_460.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/JWE_01-F_FIL_460.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/JWE_01-F_FIL_460.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/JWE_01-F_FIL_460.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/JWE_01-F_FIL_460.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/JWE_01-F_FIL_460.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/JWE_01-F_FIL_460.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/JWE_01-F_FIL_460.clustS.gz') 2016-10-03 10:01:38,613 pid=4262 [jointestimate.py] ERROR sample GNZ_20-F_HAL_482 did not finish 2016-10-03 10:01:38,613 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_20-F_HAL_482.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_20-F_HAL_482.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_20-F_HAL_482.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_20-F_HAL_482.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_20-F_HAL_482.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_20-F_HAL_482.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_20-F_HAL_482.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_20-F_HAL_482.clustS.gz') 2016-10-03 10:01:38,613 pid=4262 [jointestimate.py] ERROR sample HAL_05-G3_HAL_176 did not finish 2016-10-03 10:01:38,614 pid=4262 [jointestimate.py] ERROR sample BUS_02-G1_HAL_037 did not finish 2016-10-03 10:01:38,614 pid=4262 [jointestimate.py] ERROR sample PFL_13-G1_HAL_264 did not finish 2016-10-03 10:01:38,614 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PFL_13-G1_HAL_264.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PFL_13-G1_HAL_264.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PFL_13-G1_HAL_264.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PFL_13-G1_HAL_264.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PFL_13-G1_HAL_264.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PFL_13-G1_HAL_264.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PFL_13-G1_HAL_264.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PFL_13-G1_HAL_264.clustS.gz') 2016-10-03 10:01:38,614 pid=4262 [jointestimate.py] ERROR sample DRS_06-F_HAL_480 did not finish 2016-10-03 10:01:38,615 pid=4262 [jointestimate.py] ERROR sample SEV_01-F_HAL_288 did not finish 2016-10-03 10:01:38,615 pid=4262 [jointestimate.py] ERROR sample ALI_06-G1_HAL_009 did not finish 2016-10-03 10:01:38,615 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ALI_06-G1_HAL_009.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ALI_06-G1_HAL_009.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ALI_06-G1_HAL_009.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ALI_06-G1_HAL_009.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ALI_06-G1_HAL_009.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ALI_06-G1_HAL_009.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ALI_06-G1_HAL_009.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ALI_06-G1_HAL_009.clustS.gz') 2016-10-03 10:01:38,615 pid=4262 [jointestimate.py] ERROR sample DRS_05-F_HAL_479 did not finish 2016-10-03 10:01:38,615 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DRS_05-F_HAL_479.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DRS_05-F_HAL_479.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DRS_05-F_HAL_479.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DRS_05-F_HAL_479.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DRS_05-F_HAL_479.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DRS_05-F_HAL_479.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DRS_05-F_HAL_479.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DRS_05-F_HAL_479.clustS.gz') 2016-10-03 10:01:38,616 pid=4262 [jointestimate.py] ERROR sample BBF_05_F_HAL_622 did not finish 2016-10-03 10:01:38,616 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BBF_05_F_HAL_622.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BBF_05_F_HAL_622.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BBF_05_F_HAL_622.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BBF_05_F_HAL_622.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BBF_05_F_HAL_622.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BBF_05_F_HAL_622.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BBF_05_F_HAL_622.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BBF_05_F_HAL_622.clustS.gz') 2016-10-03 10:01:38,617 pid=4262 [jointestimate.py] ERROR sample KEN_10_F_HAL_769 did not finish 2016-10-03 10:01:38,617 pid=4262 [jointestimate.py] ERROR sample PDT_03-F_HAL_427 did not finish 2016-10-03 10:01:38,618 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDT_03-F_HAL_427.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDT_03-F_HAL_427.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDT_03-F_HAL_427.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDT_03-F_HAL_427.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDT_03-F_HAL_427.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDT_03-F_HAL_427.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDT_03-F_HAL_427.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDT_03-F_HAL_427.clustS.gz') 2016-10-03 10:01:38,618 pid=4262 [jointestimate.py] ERROR sample MAP_04_F_HAL_578 did not finish 2016-10-03 10:01:38,618 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/MAP_04_F_HAL_578.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/MAP_04_F_HAL_578.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/MAP_04_F_HAL_578.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/MAP_04_F_HAL_578.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/MAP_04_F_HAL_578.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/MAP_04_F_HAL_578.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/MAP_04_F_HAL_578.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/MAP_04_F_HAL_578.clustS.gz') 2016-10-03 10:01:38,619 pid=4262 [jointestimate.py] ERROR sample PRT_03-F_HAL_273 did not finish 2016-10-03 10:01:38,620 pid=4262 [jointestimate.py] ERROR sample SEV_08-F_HAL_295 did not finish 2016-10-03 10:01:38,620 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SEV_08-F_HAL_295.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SEV_08-F_HAL_295.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SEV_08-F_HAL_295.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SEV_08-F_HAL_295.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SEV_08-F_HAL_295.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SEV_08-F_HAL_295.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SEV_08-F_HAL_295.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SEV_08-F_HAL_295.clustS.gz') 2016-10-03 10:01:38,621 pid=4262 [jointestimate.py] ERROR sample GNH_10-G1_HAL_173 did not finish 2016-10-03 10:01:38,621 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNH_10-G1_HAL_173.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNH_10-G1_HAL_173.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNH_10-G1_HAL_173.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNH_10-G1_HAL_173.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNH_10-G1_HAL_173.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNH_10-G1_HAL_173.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNH_10-G1_HAL_173.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNH_10-G1_HAL_173.clustS.gz') 2016-10-03 10:01:38,622 pid=4262 [jointestimate.py] ERROR sample VIR_VS16B_VIR_469 did not finish 2016-10-03 10:01:38,622 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/VIR_VS16B_VIR_469.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/VIR_VS16B_VIR_469.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/VIR_VS16B_VIR_469.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/VIR_VS16B_VIR_469.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/VIR_VS16B_VIR_469.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/VIR_VS16B_VIR_469.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/VIR_VS16B_VIR_469.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/VIR_VS16B_VIR_469.clustS.gz') 2016-10-03 10:01:38,622 pid=4262 [jointestimate.py] ERROR sample SNO_09-F_HAL_323 did not finish 2016-10-03 10:01:38,623 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SNO_09-F_HAL_323.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SNO_09-F_HAL_323.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SNO_09-F_HAL_323.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SNO_09-F_HAL_323.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SNO_09-F_HAL_323.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SNO_09-F_HAL_323.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SNO_09-F_HAL_323.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SNO_09-F_HAL_323.clustS.gz') 2016-10-03 10:01:38,623 pid=4262 [jointestimate.py] ERROR sample VIR_WBC03_VIR_470 did not finish 2016-10-03 10:01:38,623 pid=4262 [jointestimate.py] ERROR sample CDM_01_F_HAL_584 did not finish 2016-10-03 10:01:38,623 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CDM_01_F_HAL_584.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CDM_01_F_HAL_584.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CDM_01_F_HAL_584.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CDM_01_F_HAL_584.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CDM_01_F_HAL_584.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CDM_01_F_HAL_584.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CDM_01_F_HAL_584.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CDM_01_F_HAL_584.clustS.gz') 2016-10-03 10:01:38,625 pid=4262 [jointestimate.py] ERROR sample SAP_02_F_HAL_593 did not finish 2016-10-03 10:01:38,626 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SAP_02_F_HAL_593.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SAP_02_F_HAL_593.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SAP_02_F_HAL_593.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SAP_02_F_HAL_593.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SAP_02_F_HAL_593.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SAP_02_F_HAL_593.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SAP_02_F_HAL_593.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SAP_02_F_HAL_593.clustS.gz') 2016-10-03 10:01:38,626 pid=4262 [jointestimate.py] ERROR sample NOH_05A-G1_HAL_223 did not finish 2016-10-03 10:01:38,626 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/NOH_05A-G1_HAL_223.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/NOH_05A-G1_HAL_223.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/NOH_05A-G1_HAL_223.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/NOH_05A-G1_HAL_223.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/NOH_05A-G1_HAL_223.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/NOH_05A-G1_HAL_223.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/NOH_05A-G1_HAL_223.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/NOH_05A-G1_HAL_223.clustS.gz') 2016-10-03 10:01:38,628 pid=4262 [jointestimate.py] ERROR sample SNO_53-G1_HAL_326 did not finish 2016-10-03 10:01:38,628 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SNO_53-G1_HAL_326.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SNO_53-G1_HAL_326.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SNO_53-G1_HAL_326.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SNO_53-G1_HAL_326.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SNO_53-G1_HAL_326.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SNO_53-G1_HAL_326.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SNO_53-G1_HAL_326.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SNO_53-G1_HAL_326.clustS.gz') 2016-10-03 10:01:38,629 pid=4262 [jointestimate.py] ERROR sample GMO_02-F_HAL_404 did not finish 2016-10-03 10:01:38,629 pid=4262 [jointestimate.py] ERROR sample CRC_01-G2_HAL_107 did not finish 2016-10-03 10:01:38,629 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CRC_01-G2_HAL_107.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CRC_01-G2_HAL_107.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CRC_01-G2_HAL_107.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CRC_01-G2_HAL_107.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CRC_01-G2_HAL_107.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CRC_01-G2_HAL_107.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CRC_01-G2_HAL_107.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CRC_01-G2_HAL_107.clustS.gz') 2016-10-03 10:01:38,629 pid=4262 [jointestimate.py] ERROR sample GRA_01-G3_HAL_174 did not finish 2016-10-03 10:01:38,629 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GRA_01-G3_HAL_174.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GRA_01-G3_HAL_174.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GRA_01-G3_HAL_174.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GRA_01-G3_HAL_174.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GRA_01-G3_HAL_174.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GRA_01-G3_HAL_174.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GRA_01-G3_HAL_174.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GRA_01-G3_HAL_174.clustS.gz') 2016-10-03 10:01:38,630 pid=4262 [jointestimate.py] ERROR sample TEN_01_F_HAL_605 did not finish 2016-10-03 10:01:38,630 pid=4262 [jointestimate.py] ERROR sample BBF_03_F_HAL_627 did not finish 2016-10-03 10:01:38,630 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BBF_03_F_HAL_627.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BBF_03_F_HAL_627.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BBF_03_F_HAL_627.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BBF_03_F_HAL_627.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BBF_03_F_HAL_627.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BBF_03_F_HAL_627.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BBF_03_F_HAL_627.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BBF_03_F_HAL_627.clustS.gz') 2016-10-03 10:01:38,630 pid=4262 [jointestimate.py] ERROR sample MKF_01-F_HAL_413 did not finish 2016-10-03 10:01:38,630 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MKF_01-F_HAL_413.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MKF_01-F_HAL_413.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MKF_01-F_HAL_413.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MKF_01-F_HAL_413.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MKF_01-F_HAL_413.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MKF_01-F_HAL_413.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MKF_01-F_HAL_413.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MKF_01-F_HAL_413.clustS.gz') 2016-10-03 10:01:38,631 pid=4262 [jointestimate.py] ERROR sample CKR_01-G1_HAL_066 did not finish 2016-10-03 10:01:38,631 pid=4262 [jointestimate.py] ERROR sample LMA_05-G1_HAL_199 did not finish 2016-10-03 10:01:38,632 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/LMA_05-G1_HAL_199.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/LMA_05-G1_HAL_199.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/LMA_05-G1_HAL_199.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/LMA_05-G1_HAL_199.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/LMA_05-G1_HAL_199.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/LMA_05-G1_HAL_199.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/LMA_05-G1_HAL_199.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/LMA_05-G1_HAL_199.clustS.gz') 2016-10-03 10:01:38,632 pid=4262 [jointestimate.py] ERROR sample BEL_08_F_HAL_694 did not finish 2016-10-03 10:01:38,633 pid=4262 [jointestimate.py] ERROR sample SEV_26-F_HAL_307 did not finish 2016-10-03 10:01:38,634 pid=4262 [jointestimate.py] ERROR sample SNO_12-F_HAL_324 did not finish 2016-10-03 10:01:38,635 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_12-F_HAL_324.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_12-F_HAL_324.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_12-F_HAL_324.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_12-F_HAL_324.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_12-F_HAL_324.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_12-F_HAL_324.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_12-F_HAL_324.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_12-F_HAL_324.clustS.gz') 2016-10-03 10:01:38,635 pid=4262 [jointestimate.py] ERROR sample GMO_04-F_HAL_406 did not finish 2016-10-03 10:01:38,635 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GMO_04-F_HAL_406.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GMO_04-F_HAL_406.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GMO_04-F_HAL_406.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GMO_04-F_HAL_406.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GMO_04-F_HAL_406.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GMO_04-F_HAL_406.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GMO_04-F_HAL_406.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GMO_04-F_HAL_406.clustS.gz') 2016-10-03 10:01:38,636 pid=4262 [jointestimate.py] ERROR sample HAY_07_F_HAL_865 did not finish 2016-10-03 10:01:38,636 pid=4262 [jointestimate.py] ERROR sample EDW_23_F_HAL_809 did not finish 2016-10-03 10:01:38,636 pid=4262 [jointestimate.py] ERROR sample MCR_55-F_HAL_217 did not finish 2016-10-03 10:01:38,636 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MCR_55-F_HAL_217.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MCR_55-F_HAL_217.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MCR_55-F_HAL_217.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MCR_55-F_HAL_217.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MCR_55-F_HAL_217.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MCR_55-F_HAL_217.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MCR_55-F_HAL_217.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MCR_55-F_HAL_217.clustS.gz') 2016-10-03 10:01:38,638 pid=4262 [jointestimate.py] ERROR sample BOS_02_F_HAL_683 did not finish 2016-10-03 10:01:38,638 pid=4262 [jointestimate.py] ERROR sample SEV_05-F_HAL_292 did not finish 2016-10-03 10:01:38,638 pid=4262 [jointestimate.py] ERROR sample NMX_01B-G2_HAL_221 did not finish 2016-10-03 10:01:38,639 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/NMX_01B-G2_HAL_221.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/NMX_01B-G2_HAL_221.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/NMX_01B-G2_HAL_221.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/NMX_01B-G2_HAL_221.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/NMX_01B-G2_HAL_221.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/NMX_01B-G2_HAL_221.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/NMX_01B-G2_HAL_221.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/NMX_01B-G2_HAL_221.clustS.gz') 2016-10-03 10:01:38,640 pid=4262 [jointestimate.py] ERROR sample KEN_13_F_HAL_771 did not finish 2016-10-03 10:01:38,640 pid=4262 [jointestimate.py] ERROR sample GMO_05-F_HAL_407 did not finish 2016-10-03 10:01:38,640 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GMO_05-F_HAL_407.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GMO_05-F_HAL_407.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GMO_05-F_HAL_407.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GMO_05-F_HAL_407.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GMO_05-F_HAL_407.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GMO_05-F_HAL_407.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GMO_05-F_HAL_407.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GMO_05-F_HAL_407.clustS.gz') 2016-10-03 10:01:38,640 pid=4262 [jointestimate.py] ERROR sample BBD_12_F_HAL_630 did not finish 2016-10-03 10:01:38,641 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BBD_12_F_HAL_630.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BBD_12_F_HAL_630.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BBD_12_F_HAL_630.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BBD_12_F_HAL_630.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BBD_12_F_HAL_630.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BBD_12_F_HAL_630.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BBD_12_F_HAL_630.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BBD_12_F_HAL_630.clustS.gz') 2016-10-03 10:01:38,641 pid=4262 [jointestimate.py] ERROR sample PRT_01-F_HAL_271 did not finish 2016-10-03 10:01:38,641 pid=4262 [jointestimate.py] ERROR sample BEL_11_F_HAL_690 did not finish 2016-10-03 10:01:38,641 pid=4262 [jointestimate.py] ERROR sample NMX_02-G1_HAL_222 did not finish 2016-10-03 10:01:38,642 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/NMX_02-G1_HAL_222.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/NMX_02-G1_HAL_222.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/NMX_02-G1_HAL_222.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/NMX_02-G1_HAL_222.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/NMX_02-G1_HAL_222.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/NMX_02-G1_HAL_222.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/NMX_02-G1_HAL_222.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/NMX_02-G1_HAL_222.clustS.gz') 2016-10-03 10:01:38,642 pid=4262 [jointestimate.py] ERROR sample MKF_04-F_HAL_414 did not finish 2016-10-03 10:01:38,642 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MKF_04-F_HAL_414.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MKF_04-F_HAL_414.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MKF_04-F_HAL_414.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MKF_04-F_HAL_414.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MKF_04-F_HAL_414.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MKF_04-F_HAL_414.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MKF_04-F_HAL_414.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MKF_04-F_HAL_414.clustS.gz') 2016-10-03 10:01:38,642 pid=4262 [jointestimate.py] ERROR sample TEN_03_F_HAL_603 did not finish 2016-10-03 10:01:38,642 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/TEN_03_F_HAL_603.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/TEN_03_F_HAL_603.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/TEN_03_F_HAL_603.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/TEN_03_F_HAL_603.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/TEN_03_F_HAL_603.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/TEN_03_F_HAL_603.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/TEN_03_F_HAL_603.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/TEN_03_F_HAL_603.clustS.gz') 2016-10-03 10:01:38,643 pid=4262 [jointestimate.py] ERROR sample ATC_06_F_FIL_837 did not finish 2016-10-03 10:01:38,643 pid=4262 [jointestimate.py] ERROR sample PDF_02-G1_HAL_251 did not finish 2016-10-03 10:01:38,643 pid=4262 [jointestimate.py] ERROR sample SNO_13-F_HAL_325 did not finish 2016-10-03 10:01:38,643 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_13-F_HAL_325.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_13-F_HAL_325.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_13-F_HAL_325.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_13-F_HAL_325.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_13-F_HAL_325.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_13-F_HAL_325.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_13-F_HAL_325.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SNO_13-F_HAL_325.clustS.gz') 2016-10-03 10:01:38,643 pid=4262 [jointestimate.py] ERROR sample ATO_04_F_HAL_556 did not finish 2016-10-03 10:01:38,644 pid=4262 [jointestimate.py] ERROR sample NDD_08_F_HAL_601 did not finish 2016-10-03 10:01:38,645 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDD_08_F_HAL_601.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDD_08_F_HAL_601.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDD_08_F_HAL_601.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDD_08_F_HAL_601.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDD_08_F_HAL_601.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDD_08_F_HAL_601.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDD_08_F_HAL_601.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/NDD_08_F_HAL_601.clustS.gz') 2016-10-03 10:01:38,645 pid=4262 [jointestimate.py] ERROR sample GNF_03-F_FIL_172 did not finish 2016-10-03 10:01:38,646 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNF_03-F_FIL_172.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNF_03-F_FIL_172.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNF_03-F_FIL_172.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNF_03-F_FIL_172.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNF_03-F_FIL_172.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNF_03-F_FIL_172.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNF_03-F_FIL_172.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNF_03-F_FIL_172.clustS.gz') 2016-10-03 10:01:38,648 pid=4262 [jointestimate.py] ERROR sample CHR_09_F_HAL_550 did not finish 2016-10-03 10:01:38,649 pid=4262 [jointestimate.py] ERROR sample CKR_15-G2_HAL_075 did not finish 2016-10-03 10:01:38,650 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CKR_15-G2_HAL_075.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CKR_15-G2_HAL_075.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CKR_15-G2_HAL_075.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CKR_15-G2_HAL_075.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CKR_15-G2_HAL_075.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CKR_15-G2_HAL_075.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CKR_15-G2_HAL_075.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CKR_15-G2_HAL_075.clustS.gz') 2016-10-03 10:01:38,651 pid=4262 [jointestimate.py] ERROR sample PDS_07-F_HAL_262 did not finish 2016-10-03 10:01:38,651 pid=4262 [jointestimate.py] ERROR sample SOM_06_F_HAL_657 did not finish 2016-10-03 10:01:38,651 pid=4262 [jointestimate.py] ERROR sample TLA_04_F_HAL_572 did not finish 2016-10-03 10:01:38,651 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TLA_04_F_HAL_572.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TLA_04_F_HAL_572.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TLA_04_F_HAL_572.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TLA_04_F_HAL_572.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TLA_04_F_HAL_572.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TLA_04_F_HAL_572.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TLA_04_F_HAL_572.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TLA_04_F_HAL_572.clustS.gz') 2016-10-03 10:01:38,651 pid=4262 [jointestimate.py] ERROR sample SEV_30-F_HAL_310 did not finish 2016-10-03 10:01:39,152 pid=4262 [jointestimate.py] ERROR sample GIL_19-F_HAL_164 did not finish 2016-10-03 10:01:39,156 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_19-F_HAL_164.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_19-F_HAL_164.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_19-F_HAL_164.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_19-F_HAL_164.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_19-F_HAL_164.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_19-F_HAL_164.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_19-F_HAL_164.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_19-F_HAL_164.clustS.gz') 2016-10-03 10:01:39,156 pid=4262 [jointestimate.py] ERROR sample ATC_21_F_FIL_839 did not finish 2016-10-03 10:01:39,157 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ATC_21_F_FIL_839.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ATC_21_F_FIL_839.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ATC_21_F_FIL_839.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ATC_21_F_FIL_839.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ATC_21_F_FIL_839.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ATC_21_F_FIL_839.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ATC_21_F_FIL_839.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ATC_21_F_FIL_839.clustS.gz') 2016-10-03 10:01:39,157 pid=4262 [jointestimate.py] ERROR sample BAN_12_F_HAL_739 did not finish 2016-10-03 10:01:39,158 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BAN_12_F_HAL_739.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BAN_12_F_HAL_739.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BAN_12_F_HAL_739.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BAN_12_F_HAL_739.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BAN_12_F_HAL_739.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BAN_12_F_HAL_739.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BAN_12_F_HAL_739.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BAN_12_F_HAL_739.clustS.gz') 2016-10-03 10:01:39,158 pid=4262 [jointestimate.py] ERROR sample COR_14-G1_HAL_100 did not finish 2016-10-03 10:01:39,158 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_14-G1_HAL_100.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_14-G1_HAL_100.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_14-G1_HAL_100.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_14-G1_HAL_100.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_14-G1_HAL_100.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_14-G1_HAL_100.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_14-G1_HAL_100.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_14-G1_HAL_100.clustS.gz') 2016-10-03 10:01:39,159 pid=4262 [jointestimate.py] ERROR sample TEM_02_F_HAL_498 did not finish 2016-10-03 10:01:39,159 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/TEM_02_F_HAL_498.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/TEM_02_F_HAL_498.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/TEM_02_F_HAL_498.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/TEM_02_F_HAL_498.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/TEM_02_F_HAL_498.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/TEM_02_F_HAL_498.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/TEM_02_F_HAL_498.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/TEM_02_F_HAL_498.clustS.gz') 2016-10-03 10:01:39,159 pid=4262 [jointestimate.py] ERROR sample BAN_23_F_HAL_737 did not finish 2016-10-03 10:01:39,159 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BAN_23_F_HAL_737.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BAN_23_F_HAL_737.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BAN_23_F_HAL_737.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BAN_23_F_HAL_737.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BAN_23_F_HAL_737.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BAN_23_F_HAL_737.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BAN_23_F_HAL_737.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BAN_23_F_HAL_737.clustS.gz') 2016-10-03 10:01:39,160 pid=4262 [jointestimate.py] ERROR sample BUR_04_F_HAL_666 did not finish 2016-10-03 10:01:39,160 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BUR_04_F_HAL_666.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BUR_04_F_HAL_666.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BUR_04_F_HAL_666.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BUR_04_F_HAL_666.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BUR_04_F_HAL_666.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BUR_04_F_HAL_666.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BUR_04_F_HAL_666.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BUR_04_F_HAL_666.clustS.gz') 2016-10-03 10:01:39,160 pid=4262 [jointestimate.py] ERROR sample COL_14_F_HAL_695 did not finish 2016-10-03 10:01:39,160 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/COL_14_F_HAL_695.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/COL_14_F_HAL_695.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/COL_14_F_HAL_695.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/COL_14_F_HAL_695.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/COL_14_F_HAL_695.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/COL_14_F_HAL_695.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/COL_14_F_HAL_695.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/COL_14_F_HAL_695.clustS.gz') 2016-10-03 10:01:39,161 pid=4262 [jointestimate.py] ERROR sample DRS_02-F_HAL_476 did not finish 2016-10-03 10:01:39,161 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/DRS_02-F_HAL_476.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/DRS_02-F_HAL_476.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/DRS_02-F_HAL_476.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/DRS_02-F_HAL_476.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/DRS_02-F_HAL_476.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/DRS_02-F_HAL_476.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/DRS_02-F_HAL_476.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/DRS_02-F_HAL_476.clustS.gz') 2016-10-03 10:01:39,167 pid=4262 [jointestimate.py] ERROR sample GNZ_32_2-F_HAL_494 did not finish 2016-10-03 10:01:39,167 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_32_2-F_HAL_494.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_32_2-F_HAL_494.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_32_2-F_HAL_494.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_32_2-F_HAL_494.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_32_2-F_HAL_494.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_32_2-F_HAL_494.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_32_2-F_HAL_494.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_32_2-F_HAL_494.clustS.gz') 2016-10-03 10:01:39,168 pid=4262 [jointestimate.py] ERROR sample HUA_03_F_HAL_527 did not finish 2016-10-03 10:01:39,168 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HUA_03_F_HAL_527.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HUA_03_F_HAL_527.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HUA_03_F_HAL_527.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HUA_03_F_HAL_527.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HUA_03_F_HAL_527.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HUA_03_F_HAL_527.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HUA_03_F_HAL_527.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HUA_03_F_HAL_527.clustS.gz') 2016-10-03 10:01:39,168 pid=4262 [jointestimate.py] ERROR sample GNZ_22_2-F_HAL_484 did not finish 2016-10-03 10:01:39,168 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_22_2-F_HAL_484.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_22_2-F_HAL_484.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_22_2-F_HAL_484.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_22_2-F_HAL_484.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_22_2-F_HAL_484.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_22_2-F_HAL_484.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_22_2-F_HAL_484.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_22_2-F_HAL_484.clustS.gz') 2016-10-03 10:01:39,171 pid=4262 [jointestimate.py] ERROR sample TWC_08_F_HAL_669 did not finish 2016-10-03 10:01:39,172 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TWC_08_F_HAL_669.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TWC_08_F_HAL_669.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TWC_08_F_HAL_669.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TWC_08_F_HAL_669.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TWC_08_F_HAL_669.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TWC_08_F_HAL_669.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TWC_08_F_HAL_669.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TWC_08_F_HAL_669.clustS.gz') 2016-10-03 10:01:39,172 pid=4262 [jointestimate.py] ERROR sample KER_20_F_HAL_757 did not finish 2016-10-03 10:01:39,172 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/KER_20_F_HAL_757.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/KER_20_F_HAL_757.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/KER_20_F_HAL_757.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/KER_20_F_HAL_757.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/KER_20_F_HAL_757.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/KER_20_F_HAL_757.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/KER_20_F_HAL_757.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/KER_20_F_HAL_757.clustS.gz') 2016-10-03 10:01:39,172 pid=4262 [jointestimate.py] ERROR sample ESE_02-G2_HAL_140 did not finish 2016-10-03 10:01:39,173 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ESE_02-G2_HAL_140.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ESE_02-G2_HAL_140.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ESE_02-G2_HAL_140.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ESE_02-G2_HAL_140.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ESE_02-G2_HAL_140.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ESE_02-G2_HAL_140.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ESE_02-G2_HAL_140.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ESE_02-G2_HAL_140.clustS.gz') 2016-10-03 10:01:39,173 pid=4262 [jointestimate.py] ERROR sample SPE_33-F_HAL_343 did not finish 2016-10-03 10:01:39,173 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_33-F_HAL_343.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_33-F_HAL_343.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_33-F_HAL_343.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_33-F_HAL_343.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_33-F_HAL_343.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_33-F_HAL_343.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_33-F_HAL_343.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_33-F_HAL_343.clustS.gz') 2016-10-03 10:01:39,174 pid=4262 [jointestimate.py] ERROR sample PIN_01A-G3_HAL_265 did not finish 2016-10-03 10:01:39,174 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/PIN_01A-G3_HAL_265.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/PIN_01A-G3_HAL_265.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/PIN_01A-G3_HAL_265.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/PIN_01A-G3_HAL_265.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/PIN_01A-G3_HAL_265.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/PIN_01A-G3_HAL_265.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/PIN_01A-G3_HAL_265.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/PIN_01A-G3_HAL_265.clustS.gz') 2016-10-03 10:01:39,174 pid=4262 [jointestimate.py] ERROR sample CBS_06-F_HAL_435 did not finish 2016-10-03 10:01:39,174 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CBS_06-F_HAL_435.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CBS_06-F_HAL_435.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CBS_06-F_HAL_435.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CBS_06-F_HAL_435.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CBS_06-F_HAL_435.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CBS_06-F_HAL_435.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CBS_06-F_HAL_435.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CBS_06-F_HAL_435.clustS.gz') 2016-10-03 10:01:39,175 pid=4262 [jointestimate.py] ERROR sample REA_09_F_HAL_797 did not finish 2016-10-03 10:01:39,175 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/REA_09_F_HAL_797.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/REA_09_F_HAL_797.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/REA_09_F_HAL_797.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/REA_09_F_HAL_797.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/REA_09_F_HAL_797.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/REA_09_F_HAL_797.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/REA_09_F_HAL_797.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/REA_09_F_HAL_797.clustS.gz') 2016-10-03 10:01:39,176 pid=4262 [jointestimate.py] ERROR sample CKR_02-G1_HAL_067 did not finish 2016-10-03 10:01:39,177 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CKR_02-G1_HAL_067.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CKR_02-G1_HAL_067.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CKR_02-G1_HAL_067.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CKR_02-G1_HAL_067.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CKR_02-G1_HAL_067.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CKR_02-G1_HAL_067.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CKR_02-G1_HAL_067.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CKR_02-G1_HAL_067.clustS.gz') 2016-10-03 10:01:39,177 pid=4262 [jointestimate.py] ERROR sample KER_12_F_HAL_752 did not finish 2016-10-03 10:01:39,177 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KER_12_F_HAL_752.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KER_12_F_HAL_752.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KER_12_F_HAL_752.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KER_12_F_HAL_752.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KER_12_F_HAL_752.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KER_12_F_HAL_752.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KER_12_F_HAL_752.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KER_12_F_HAL_752.clustS.gz') 2016-10-03 10:01:39,178 pid=4262 [jointestimate.py] ERROR sample REA_01_F_HAL_799 did not finish 2016-10-03 10:01:39,178 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/REA_01_F_HAL_799.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/REA_01_F_HAL_799.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/REA_01_F_HAL_799.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/REA_01_F_HAL_799.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/REA_01_F_HAL_799.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/REA_01_F_HAL_799.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/REA_01_F_HAL_799.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/REA_01_F_HAL_799.clustS.gz') 2016-10-03 10:01:39,179 pid=4262 [jointestimate.py] ERROR sample CAM_02-F_FIL_443 did not finish 2016-10-03 10:01:39,179 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CAM_02-F_FIL_443.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CAM_02-F_FIL_443.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CAM_02-F_FIL_443.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CAM_02-F_FIL_443.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CAM_02-F_FIL_443.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CAM_02-F_FIL_443.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CAM_02-F_FIL_443.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CAM_02-F_FIL_443.clustS.gz') 2016-10-03 10:01:39,179 pid=4262 [jointestimate.py] ERROR sample GIL_16-F_HAL_161 did not finish 2016-10-03 10:01:39,179 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GIL_16-F_HAL_161.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GIL_16-F_HAL_161.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GIL_16-F_HAL_161.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GIL_16-F_HAL_161.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GIL_16-F_HAL_161.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GIL_16-F_HAL_161.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GIL_16-F_HAL_161.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GIL_16-F_HAL_161.clustS.gz') 2016-10-03 10:01:39,182 pid=4262 [jointestimate.py] ERROR sample COL_11_F_HAL_685 did not finish 2016-10-03 10:01:39,182 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/COL_11_F_HAL_685.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/COL_11_F_HAL_685.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/COL_11_F_HAL_685.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/COL_11_F_HAL_685.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/COL_11_F_HAL_685.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/COL_11_F_HAL_685.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/COL_11_F_HAL_685.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/COL_11_F_HAL_685.clustS.gz') 2016-10-03 10:01:39,183 pid=4262 [jointestimate.py] ERROR sample CHR_02_F_HAL_543 did not finish 2016-10-03 10:01:39,183 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CHR_02_F_HAL_543.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CHR_02_F_HAL_543.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CHR_02_F_HAL_543.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CHR_02_F_HAL_543.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CHR_02_F_HAL_543.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CHR_02_F_HAL_543.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CHR_02_F_HAL_543.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CHR_02_F_HAL_543.clustS.gz') 2016-10-03 10:01:39,183 pid=4262 [jointestimate.py] ERROR sample EDW_16_F_HAL_810 did not finish 2016-10-03 10:01:39,183 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/EDW_16_F_HAL_810.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/EDW_16_F_HAL_810.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/EDW_16_F_HAL_810.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/EDW_16_F_HAL_810.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/EDW_16_F_HAL_810.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/EDW_16_F_HAL_810.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/EDW_16_F_HAL_810.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/EDW_16_F_HAL_810.clustS.gz') 2016-10-03 10:01:39,184 pid=4262 [jointestimate.py] ERROR sample SPE_23-F_HAL_334 did not finish 2016-10-03 10:01:39,184 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_23-F_HAL_334.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_23-F_HAL_334.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_23-F_HAL_334.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_23-F_HAL_334.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_23-F_HAL_334.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_23-F_HAL_334.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_23-F_HAL_334.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_23-F_HAL_334.clustS.gz') 2016-10-03 10:01:39,185 pid=4262 [jointestimate.py] ERROR sample BUR_07_F_HAL_667 did not finish 2016-10-03 10:01:39,185 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/BUR_07_F_HAL_667.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/BUR_07_F_HAL_667.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/BUR_07_F_HAL_667.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/BUR_07_F_HAL_667.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/BUR_07_F_HAL_667.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/BUR_07_F_HAL_667.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/BUR_07_F_HAL_667.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/BUR_07_F_HAL_667.clustS.gz') 2016-10-03 10:01:39,186 pid=4262 [jointestimate.py] ERROR sample HUA_01_F_HAL_525 did not finish 2016-10-03 10:01:39,186 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HUA_01_F_HAL_525.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HUA_01_F_HAL_525.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HUA_01_F_HAL_525.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HUA_01_F_HAL_525.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HUA_01_F_HAL_525.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HUA_01_F_HAL_525.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HUA_01_F_HAL_525.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HUA_01_F_HAL_525.clustS.gz') 2016-10-03 10:01:39,687 pid=4262 [jointestimate.py] ERROR sample REA_03_F_HAL_788 did not finish 2016-10-03 10:01:39,688 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/REA_03_F_HAL_788.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/REA_03_F_HAL_788.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/REA_03_F_HAL_788.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/REA_03_F_HAL_788.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/REA_03_F_HAL_788.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/REA_03_F_HAL_788.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/REA_03_F_HAL_788.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/REA_03_F_HAL_788.clustS.gz') 2016-10-03 10:01:39,688 pid=4262 [jointestimate.py] ERROR sample HAY_01_F_HAL_859 did not finish 2016-10-03 10:01:39,688 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/HAY_01_F_HAL_859.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/HAY_01_F_HAL_859.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/HAY_01_F_HAL_859.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/HAY_01_F_HAL_859.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/HAY_01_F_HAL_859.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/HAY_01_F_HAL_859.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/HAY_01_F_HAL_859.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/HAY_01_F_HAL_859.clustS.gz') 2016-10-03 10:01:39,689 pid=4262 [jointestimate.py] ERROR sample CKR_10-G1_HAL_073 did not finish 2016-10-03 10:01:39,689 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CKR_10-G1_HAL_073.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CKR_10-G1_HAL_073.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CKR_10-G1_HAL_073.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CKR_10-G1_HAL_073.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CKR_10-G1_HAL_073.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CKR_10-G1_HAL_073.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CKR_10-G1_HAL_073.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CKR_10-G1_HAL_073.clustS.gz') 2016-10-03 10:01:39,689 pid=4262 [jointestimate.py] ERROR sample TWC_04_F_HAL_661 did not finish 2016-10-03 10:01:39,690 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/TWC_04_F_HAL_661.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/TWC_04_F_HAL_661.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/TWC_04_F_HAL_661.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/TWC_04_F_HAL_661.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/TWC_04_F_HAL_661.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/TWC_04_F_HAL_661.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/TWC_04_F_HAL_661.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/TWC_04_F_HAL_661.clustS.gz') 2016-10-03 10:01:39,690 pid=4262 [jointestimate.py] ERROR sample MOR_04_F_HAL_522 did not finish 2016-10-03 10:01:39,691 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MOR_04_F_HAL_522.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MOR_04_F_HAL_522.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MOR_04_F_HAL_522.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MOR_04_F_HAL_522.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MOR_04_F_HAL_522.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MOR_04_F_HAL_522.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MOR_04_F_HAL_522.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MOR_04_F_HAL_522.clustS.gz') 2016-10-03 10:01:39,691 pid=4262 [jointestimate.py] ERROR sample PRT_05-F_HAL_275 did not finish 2016-10-03 10:01:39,691 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PRT_05-F_HAL_275.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PRT_05-F_HAL_275.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PRT_05-F_HAL_275.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PRT_05-F_HAL_275.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PRT_05-F_HAL_275.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PRT_05-F_HAL_275.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PRT_05-F_HAL_275.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PRT_05-F_HAL_275.clustS.gz') 2016-10-03 10:01:39,692 pid=4262 [jointestimate.py] ERROR sample COL_17_F_HAL_688 did not finish 2016-10-03 10:01:39,692 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COL_17_F_HAL_688.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COL_17_F_HAL_688.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COL_17_F_HAL_688.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COL_17_F_HAL_688.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COL_17_F_HAL_688.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COL_17_F_HAL_688.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COL_17_F_HAL_688.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COL_17_F_HAL_688.clustS.gz') 2016-10-03 10:01:39,693 pid=4262 [jointestimate.py] ERROR sample GIL_23-G1_HAL_168 did not finish 2016-10-03 10:01:39,693 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/GIL_23-G1_HAL_168.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/GIL_23-G1_HAL_168.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/GIL_23-G1_HAL_168.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/GIL_23-G1_HAL_168.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/GIL_23-G1_HAL_168.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/GIL_23-G1_HAL_168.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/GIL_23-G1_HAL_168.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/GIL_23-G1_HAL_168.clustS.gz') 2016-10-03 10:01:39,704 pid=4262 [jointestimate.py] ERROR sample RAR_05_F_HAL_894 did not finish 2016-10-03 10:01:39,704 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/RAR_05_F_HAL_894.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/RAR_05_F_HAL_894.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/RAR_05_F_HAL_894.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/RAR_05_F_HAL_894.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/RAR_05_F_HAL_894.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/RAR_05_F_HAL_894.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/RAR_05_F_HAL_894.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/RAR_05_F_HAL_894.clustS.gz') 2016-10-03 10:01:39,705 pid=4262 [jointestimate.py] ERROR sample BAN_01_F_HAL_741 did not finish 2016-10-03 10:01:39,705 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BAN_01_F_HAL_741.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BAN_01_F_HAL_741.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BAN_01_F_HAL_741.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BAN_01_F_HAL_741.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BAN_01_F_HAL_741.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BAN_01_F_HAL_741.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BAN_01_F_HAL_741.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BAN_01_F_HAL_741.clustS.gz') 2016-10-03 10:01:39,706 pid=4262 [jointestimate.py] ERROR sample RAR_01_F_HAL_895 did not finish 2016-10-03 10:01:39,707 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/RAR_01_F_HAL_895.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/RAR_01_F_HAL_895.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/RAR_01_F_HAL_895.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/RAR_01_F_HAL_895.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/RAR_01_F_HAL_895.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/RAR_01_F_HAL_895.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/RAR_01_F_HAL_895.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/RAR_01_F_HAL_895.clustS.gz') 2016-10-03 10:01:39,719 pid=4262 [jointestimate.py] ERROR sample BAN_07_F_HAL_740 did not finish 2016-10-03 10:01:39,719 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BAN_07_F_HAL_740.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BAN_07_F_HAL_740.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BAN_07_F_HAL_740.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BAN_07_F_HAL_740.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BAN_07_F_HAL_740.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BAN_07_F_HAL_740.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BAN_07_F_HAL_740.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BAN_07_F_HAL_740.clustS.gz') 2016-10-03 10:01:40,221 pid=4262 [jointestimate.py] ERROR sample TEM_06_F_HAL_502 did not finish 2016-10-03 10:01:40,221 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TEM_06_F_HAL_502.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TEM_06_F_HAL_502.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TEM_06_F_HAL_502.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TEM_06_F_HAL_502.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TEM_06_F_HAL_502.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TEM_06_F_HAL_502.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TEM_06_F_HAL_502.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TEM_06_F_HAL_502.clustS.gz') 2016-10-03 10:01:40,222 pid=4262 [jointestimate.py] ERROR sample PDF_05-G1_HAL_254 did not finish 2016-10-03 10:01:40,222 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PDF_05-G1_HAL_254.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PDF_05-G1_HAL_254.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PDF_05-G1_HAL_254.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PDF_05-G1_HAL_254.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PDF_05-G1_HAL_254.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PDF_05-G1_HAL_254.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PDF_05-G1_HAL_254.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PDF_05-G1_HAL_254.clustS.gz') 2016-10-03 10:01:40,222 pid=4262 [jointestimate.py] ERROR sample SEV_03-F_HAL_290 did not finish 2016-10-03 10:01:40,222 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SEV_03-F_HAL_290.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SEV_03-F_HAL_290.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SEV_03-F_HAL_290.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SEV_03-F_HAL_290.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SEV_03-F_HAL_290.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SEV_03-F_HAL_290.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SEV_03-F_HAL_290.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SEV_03-F_HAL_290.clustS.gz') 2016-10-03 10:01:40,223 pid=4262 [jointestimate.py] ERROR sample AWR_01_2-G2_FIL_027 did not finish 2016-10-03 10:01:40,223 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/AWR_01_2-G2_FIL_027.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/AWR_01_2-G2_FIL_027.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/AWR_01_2-G2_FIL_027.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/AWR_01_2-G2_FIL_027.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/AWR_01_2-G2_FIL_027.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/AWR_01_2-G2_FIL_027.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/AWR_01_2-G2_FIL_027.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/AWR_01_2-G2_FIL_027.clustS.gz') 2016-10-03 10:01:40,224 pid=4262 [jointestimate.py] ERROR sample GIL_18-G1_HAL_163 did not finish 2016-10-03 10:01:40,227 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GIL_18-G1_HAL_163.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GIL_18-G1_HAL_163.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GIL_18-G1_HAL_163.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GIL_18-G1_HAL_163.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GIL_18-G1_HAL_163.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GIL_18-G1_HAL_163.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GIL_18-G1_HAL_163.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GIL_18-G1_HAL_163.clustS.gz') 2016-10-03 10:01:40,228 pid=4262 [jointestimate.py] ERROR sample BEX_03_F_HAL_763 did not finish 2016-10-03 10:01:40,228 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BEX_03_F_HAL_763.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BEX_03_F_HAL_763.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BEX_03_F_HAL_763.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BEX_03_F_HAL_763.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BEX_03_F_HAL_763.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BEX_03_F_HAL_763.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BEX_03_F_HAL_763.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BEX_03_F_HAL_763.clustS.gz') 2016-10-03 10:01:40,229 pid=4262 [jointestimate.py] ERROR sample ART_12_2-F_HAL_026 did not finish 2016-10-03 10:01:40,229 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ART_12_2-F_HAL_026.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ART_12_2-F_HAL_026.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ART_12_2-F_HAL_026.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ART_12_2-F_HAL_026.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ART_12_2-F_HAL_026.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ART_12_2-F_HAL_026.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ART_12_2-F_HAL_026.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ART_12_2-F_HAL_026.clustS.gz') 2016-10-03 10:01:40,229 pid=4262 [jointestimate.py] ERROR sample CLD_04-G1_HAL_080 did not finish 2016-10-03 10:01:40,229 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CLD_04-G1_HAL_080.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CLD_04-G1_HAL_080.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CLD_04-G1_HAL_080.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CLD_04-G1_HAL_080.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CLD_04-G1_HAL_080.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CLD_04-G1_HAL_080.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CLD_04-G1_HAL_080.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CLD_04-G1_HAL_080.clustS.gz') 2016-10-03 10:01:40,230 pid=4262 [jointestimate.py] ERROR sample GNZ_22_2-F_HAL_486 did not finish 2016-10-03 10:01:40,230 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_22_2-F_HAL_486.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_22_2-F_HAL_486.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_22_2-F_HAL_486.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_22_2-F_HAL_486.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_22_2-F_HAL_486.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_22_2-F_HAL_486.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_22_2-F_HAL_486.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_22_2-F_HAL_486.clustS.gz') 2016-10-03 10:01:40,231 pid=4262 [jointestimate.py] ERROR sample KEN_18_F_HAL_766 did not finish 2016-10-03 10:01:40,231 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KEN_18_F_HAL_766.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KEN_18_F_HAL_766.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KEN_18_F_HAL_766.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KEN_18_F_HAL_766.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KEN_18_F_HAL_766.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KEN_18_F_HAL_766.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KEN_18_F_HAL_766.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KEN_18_F_HAL_766.clustS.gz') 2016-10-03 10:01:40,231 pid=4262 [jointestimate.py] ERROR sample ERO_02_F_HAL_508 did not finish 2016-10-03 10:01:40,231 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ERO_02_F_HAL_508.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ERO_02_F_HAL_508.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ERO_02_F_HAL_508.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ERO_02_F_HAL_508.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ERO_02_F_HAL_508.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ERO_02_F_HAL_508.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ERO_02_F_HAL_508.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ERO_02_F_HAL_508.clustS.gz') 2016-10-03 10:01:40,232 pid=4262 [jointestimate.py] ERROR sample TZI_01_F_HAL_516 did not finish 2016-10-03 10:01:40,232 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/TZI_01_F_HAL_516.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/TZI_01_F_HAL_516.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/TZI_01_F_HAL_516.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/TZI_01_F_HAL_516.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/TZI_01_F_HAL_516.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/TZI_01_F_HAL_516.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/TZI_01_F_HAL_516.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/TZI_01_F_HAL_516.clustS.gz') 2016-10-03 10:01:40,232 pid=4262 [jointestimate.py] ERROR sample SLS_05-G2_HAL_312 did not finish 2016-10-03 10:01:40,233 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SLS_05-G2_HAL_312.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SLS_05-G2_HAL_312.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SLS_05-G2_HAL_312.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SLS_05-G2_HAL_312.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SLS_05-G2_HAL_312.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SLS_05-G2_HAL_312.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SLS_05-G2_HAL_312.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SLS_05-G2_HAL_312.clustS.gz') 2016-10-03 10:01:40,233 pid=4262 [jointestimate.py] ERROR sample CHR_03_F_HAL_544 did not finish 2016-10-03 10:01:40,234 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHR_03_F_HAL_544.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHR_03_F_HAL_544.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHR_03_F_HAL_544.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHR_03_F_HAL_544.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHR_03_F_HAL_544.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHR_03_F_HAL_544.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHR_03_F_HAL_544.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHR_03_F_HAL_544.clustS.gz') 2016-10-03 10:01:40,234 pid=4262 [jointestimate.py] ERROR sample THC_02_F_HAL_879 did not finish 2016-10-03 10:01:40,234 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/THC_02_F_HAL_879.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/THC_02_F_HAL_879.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/THC_02_F_HAL_879.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/THC_02_F_HAL_879.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/THC_02_F_HAL_879.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/THC_02_F_HAL_879.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/THC_02_F_HAL_879.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/THC_02_F_HAL_879.clustS.gz') 2016-10-03 10:01:40,235 pid=4262 [jointestimate.py] ERROR sample THC_06_F_HAL_883 did not finish 2016-10-03 10:01:40,235 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/THC_06_F_HAL_883.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/THC_06_F_HAL_883.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/THC_06_F_HAL_883.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/THC_06_F_HAL_883.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/THC_06_F_HAL_883.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/THC_06_F_HAL_883.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/THC_06_F_HAL_883.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/THC_06_F_HAL_883.clustS.gz') 2016-10-03 10:01:40,235 pid=4262 [jointestimate.py] ERROR sample COR_02-G1_HAL_091 did not finish 2016-10-03 10:01:40,235 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_02-G1_HAL_091.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_02-G1_HAL_091.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_02-G1_HAL_091.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_02-G1_HAL_091.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_02-G1_HAL_091.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_02-G1_HAL_091.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_02-G1_HAL_091.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_02-G1_HAL_091.clustS.gz') 2016-10-03 10:01:40,236 pid=4262 [jointestimate.py] ERROR sample MOR_06_F_HAL_524 did not finish 2016-10-03 10:01:40,236 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MOR_06_F_HAL_524.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MOR_06_F_HAL_524.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MOR_06_F_HAL_524.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MOR_06_F_HAL_524.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MOR_06_F_HAL_524.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MOR_06_F_HAL_524.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MOR_06_F_HAL_524.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/MOR_06_F_HAL_524.clustS.gz') 2016-10-03 10:01:40,243 pid=4262 [jointestimate.py] ERROR sample HAR_07_F_FIL_715 did not finish 2016-10-03 10:01:40,243 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HAR_07_F_FIL_715.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HAR_07_F_FIL_715.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HAR_07_F_FIL_715.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HAR_07_F_FIL_715.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HAR_07_F_FIL_715.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HAR_07_F_FIL_715.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HAR_07_F_FIL_715.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HAR_07_F_FIL_715.clustS.gz') 2016-10-03 10:01:40,244 pid=4262 [jointestimate.py] ERROR sample SEM_02-G2_HAL_285 did not finish 2016-10-03 10:01:40,244 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SEM_02-G2_HAL_285.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SEM_02-G2_HAL_285.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SEM_02-G2_HAL_285.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SEM_02-G2_HAL_285.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SEM_02-G2_HAL_285.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SEM_02-G2_HAL_285.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SEM_02-G2_HAL_285.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SEM_02-G2_HAL_285.clustS.gz') 2016-10-03 10:01:40,244 pid=4262 [jointestimate.py] ERROR sample BEE_03-F_HAL_450 did not finish 2016-10-03 10:01:40,244 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/BEE_03-F_HAL_450.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/BEE_03-F_HAL_450.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/BEE_03-F_HAL_450.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/BEE_03-F_HAL_450.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/BEE_03-F_HAL_450.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/BEE_03-F_HAL_450.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/BEE_03-F_HAL_450.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/BEE_03-F_HAL_450.clustS.gz') 2016-10-03 10:01:40,245 pid=4262 [jointestimate.py] ERROR sample LME_07-G1_HAL_207 did not finish 2016-10-03 10:01:40,245 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/LME_07-G1_HAL_207.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/LME_07-G1_HAL_207.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/LME_07-G1_HAL_207.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/LME_07-G1_HAL_207.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/LME_07-G1_HAL_207.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/LME_07-G1_HAL_207.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/LME_07-G1_HAL_207.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/LME_07-G1_HAL_207.clustS.gz') 2016-10-03 10:01:40,245 pid=4262 [jointestimate.py] ERROR sample HUA_06_F_HAL_530 did not finish 2016-10-03 10:01:40,246 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/HUA_06_F_HAL_530.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/HUA_06_F_HAL_530.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/HUA_06_F_HAL_530.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/HUA_06_F_HAL_530.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/HUA_06_F_HAL_530.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/HUA_06_F_HAL_530.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/HUA_06_F_HAL_530.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/HUA_06_F_HAL_530.clustS.gz') 2016-10-03 10:01:40,246 pid=4262 [jointestimate.py] ERROR sample WBW_10_2-G1_HAL_378 did not finish 2016-10-03 10:01:40,246 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/WBW_10_2-G1_HAL_378.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/WBW_10_2-G1_HAL_378.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/WBW_10_2-G1_HAL_378.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/WBW_10_2-G1_HAL_378.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/WBW_10_2-G1_HAL_378.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/WBW_10_2-G1_HAL_378.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/WBW_10_2-G1_HAL_378.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/WBW_10_2-G1_HAL_378.clustS.gz') 2016-10-03 10:01:40,246 pid=4262 [jointestimate.py] ERROR sample ATC_05_F_HAL_834 did not finish 2016-10-03 10:01:40,247 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ATC_05_F_HAL_834.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ATC_05_F_HAL_834.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ATC_05_F_HAL_834.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ATC_05_F_HAL_834.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ATC_05_F_HAL_834.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ATC_05_F_HAL_834.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ATC_05_F_HAL_834.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ATC_05_F_HAL_834.clustS.gz') 2016-10-03 10:01:40,248 pid=4262 [jointestimate.py] ERROR sample CHR_10_F_HAL_551 did not finish 2016-10-03 10:01:40,248 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CHR_10_F_HAL_551.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CHR_10_F_HAL_551.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CHR_10_F_HAL_551.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CHR_10_F_HAL_551.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CHR_10_F_HAL_551.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CHR_10_F_HAL_551.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CHR_10_F_HAL_551.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CHR_10_F_HAL_551.clustS.gz') 2016-10-03 10:01:40,248 pid=4262 [jointestimate.py] ERROR sample ENR_01-F_HAL_409 did not finish 2016-10-03 10:01:40,249 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ENR_01-F_HAL_409.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ENR_01-F_HAL_409.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ENR_01-F_HAL_409.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ENR_01-F_HAL_409.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ENR_01-F_HAL_409.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ENR_01-F_HAL_409.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ENR_01-F_HAL_409.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ENR_01-F_HAL_409.clustS.gz') 2016-10-03 10:01:40,249 pid=4262 [jointestimate.py] ERROR sample THC_05_F_HAL_882 did not finish 2016-10-03 10:01:40,249 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/THC_05_F_HAL_882.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/THC_05_F_HAL_882.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/THC_05_F_HAL_882.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/THC_05_F_HAL_882.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/THC_05_F_HAL_882.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/THC_05_F_HAL_882.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/THC_05_F_HAL_882.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/THC_05_F_HAL_882.clustS.gz') 2016-10-03 10:01:40,250 pid=4262 [jointestimate.py] ERROR sample CUT_02_F_HAL_518 did not finish 2016-10-03 10:01:40,250 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CUT_02_F_HAL_518.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CUT_02_F_HAL_518.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CUT_02_F_HAL_518.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CUT_02_F_HAL_518.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CUT_02_F_HAL_518.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CUT_02_F_HAL_518.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CUT_02_F_HAL_518.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CUT_02_F_HAL_518.clustS.gz') 2016-10-03 10:01:40,251 pid=4262 [jointestimate.py] ERROR sample ART_09-F_HAL_023 did not finish 2016-10-03 10:01:40,253 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ART_09-F_HAL_023.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ART_09-F_HAL_023.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ART_09-F_HAL_023.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ART_09-F_HAL_023.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ART_09-F_HAL_023.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ART_09-F_HAL_023.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ART_09-F_HAL_023.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ART_09-F_HAL_023.clustS.gz') 2016-10-03 10:01:40,259 pid=4262 [jointestimate.py] ERROR sample GMO_01-F_HAL_403 did not finish 2016-10-03 10:01:40,259 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GMO_01-F_HAL_403.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GMO_01-F_HAL_403.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GMO_01-F_HAL_403.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GMO_01-F_HAL_403.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GMO_01-F_HAL_403.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GMO_01-F_HAL_403.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GMO_01-F_HAL_403.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GMO_01-F_HAL_403.clustS.gz') 2016-10-03 10:01:40,259 pid=4262 [jointestimate.py] ERROR sample BEX_02_F_HAL_764 did not finish 2016-10-03 10:01:40,260 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BEX_02_F_HAL_764.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BEX_02_F_HAL_764.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BEX_02_F_HAL_764.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BEX_02_F_HAL_764.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BEX_02_F_HAL_764.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BEX_02_F_HAL_764.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BEX_02_F_HAL_764.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BEX_02_F_HAL_764.clustS.gz') 2016-10-03 10:01:40,260 pid=4262 [jointestimate.py] ERROR sample RAR_09_F_HAL_893 did not finish 2016-10-03 10:01:40,260 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAR_09_F_HAL_893.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAR_09_F_HAL_893.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAR_09_F_HAL_893.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAR_09_F_HAL_893.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAR_09_F_HAL_893.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAR_09_F_HAL_893.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAR_09_F_HAL_893.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAR_09_F_HAL_893.clustS.gz') 2016-10-03 10:01:40,761 pid=4262 [jointestimate.py] ERROR sample TEM_08_F_HAL_504 did not finish 2016-10-03 10:01:40,761 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TEM_08_F_HAL_504.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TEM_08_F_HAL_504.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TEM_08_F_HAL_504.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TEM_08_F_HAL_504.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TEM_08_F_HAL_504.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TEM_08_F_HAL_504.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TEM_08_F_HAL_504.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/TEM_08_F_HAL_504.clustS.gz') 2016-10-03 10:01:40,762 pid=4262 [jointestimate.py] ERROR sample KNT_14B-G3_HAL_191 did not finish 2016-10-03 10:01:40,763 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/KNT_14B-G3_HAL_191.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/KNT_14B-G3_HAL_191.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/KNT_14B-G3_HAL_191.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/KNT_14B-G3_HAL_191.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/KNT_14B-G3_HAL_191.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/KNT_14B-G3_HAL_191.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/KNT_14B-G3_HAL_191.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/KNT_14B-G3_HAL_191.clustS.gz') 2016-10-03 10:01:40,764 pid=4262 [jointestimate.py] ERROR sample DOF_11A-G1_HAL_118 did not finish 2016-10-03 10:01:40,764 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_11A-G1_HAL_118.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_11A-G1_HAL_118.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_11A-G1_HAL_118.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_11A-G1_HAL_118.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_11A-G1_HAL_118.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_11A-G1_HAL_118.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_11A-G1_HAL_118.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_11A-G1_HAL_118.clustS.gz') 2016-10-03 10:01:40,765 pid=4262 [jointestimate.py] ERROR sample CUT_01_F_HAL_517 did not finish 2016-10-03 10:01:40,765 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CUT_01_F_HAL_517.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CUT_01_F_HAL_517.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CUT_01_F_HAL_517.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CUT_01_F_HAL_517.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CUT_01_F_HAL_517.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CUT_01_F_HAL_517.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CUT_01_F_HAL_517.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CUT_01_F_HAL_517.clustS.gz') 2016-10-03 10:01:40,766 pid=4262 [jointestimate.py] ERROR sample BAN_17_F_HAL_735 did not finish 2016-10-03 10:01:40,766 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BAN_17_F_HAL_735.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BAN_17_F_HAL_735.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BAN_17_F_HAL_735.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BAN_17_F_HAL_735.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BAN_17_F_HAL_735.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BAN_17_F_HAL_735.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BAN_17_F_HAL_735.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/BAN_17_F_HAL_735.clustS.gz') 2016-10-03 10:01:40,768 pid=4262 [jointestimate.py] ERROR sample BME_05-G1_HAL_034 did not finish 2016-10-03 10:01:40,768 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BME_05-G1_HAL_034.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BME_05-G1_HAL_034.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BME_05-G1_HAL_034.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BME_05-G1_HAL_034.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BME_05-G1_HAL_034.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BME_05-G1_HAL_034.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BME_05-G1_HAL_034.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BME_05-G1_HAL_034.clustS.gz') 2016-10-03 10:01:40,768 pid=4262 [jointestimate.py] ERROR sample ELG_06-F_HAL_128 did not finish 2016-10-03 10:01:40,769 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_06-F_HAL_128.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_06-F_HAL_128.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_06-F_HAL_128.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_06-F_HAL_128.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_06-F_HAL_128.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_06-F_HAL_128.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_06-F_HAL_128.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_06-F_HAL_128.clustS.gz') 2016-10-03 10:01:40,770 pid=4262 [jointestimate.py] ERROR sample KER_07_F_HAL_758 did not finish 2016-10-03 10:01:40,770 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/KER_07_F_HAL_758.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/KER_07_F_HAL_758.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/KER_07_F_HAL_758.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/KER_07_F_HAL_758.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/KER_07_F_HAL_758.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/KER_07_F_HAL_758.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/KER_07_F_HAL_758.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/KER_07_F_HAL_758.clustS.gz') 2016-10-03 10:01:40,771 pid=4262 [jointestimate.py] ERROR sample HAR_03_F_FIL_711 did not finish 2016-10-03 10:01:40,771 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/HAR_03_F_FIL_711.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/HAR_03_F_FIL_711.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/HAR_03_F_FIL_711.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/HAR_03_F_FIL_711.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/HAR_03_F_FIL_711.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/HAR_03_F_FIL_711.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/HAR_03_F_FIL_711.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/HAR_03_F_FIL_711.clustS.gz') 2016-10-03 10:01:41,272 pid=4262 [jointestimate.py] ERROR sample COR_06-G1_HAL_094 did not finish 2016-10-03 10:01:41,272 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/COR_06-G1_HAL_094.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/COR_06-G1_HAL_094.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/COR_06-G1_HAL_094.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/COR_06-G1_HAL_094.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/COR_06-G1_HAL_094.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/COR_06-G1_HAL_094.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/COR_06-G1_HAL_094.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/COR_06-G1_HAL_094.clustS.gz') 2016-10-03 10:01:41,273 pid=4262 [jointestimate.py] ERROR sample BEX_14_F_HAL_761 did not finish 2016-10-03 10:01:41,273 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/BEX_14_F_HAL_761.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/BEX_14_F_HAL_761.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/BEX_14_F_HAL_761.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/BEX_14_F_HAL_761.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/BEX_14_F_HAL_761.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/BEX_14_F_HAL_761.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/BEX_14_F_HAL_761.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/BEX_14_F_HAL_761.clustS.gz') 2016-10-03 10:01:41,273 pid=4262 [jointestimate.py] ERROR sample PDF_09-F_HAL_257 did not finish 2016-10-03 10:01:41,273 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDF_09-F_HAL_257.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDF_09-F_HAL_257.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDF_09-F_HAL_257.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDF_09-F_HAL_257.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDF_09-F_HAL_257.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDF_09-F_HAL_257.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDF_09-F_HAL_257.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PDF_09-F_HAL_257.clustS.gz') 2016-10-03 10:01:41,274 pid=4262 [jointestimate.py] ERROR sample THC_03_F_HAL_880 did not finish 2016-10-03 10:01:41,274 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/THC_03_F_HAL_880.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/THC_03_F_HAL_880.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/THC_03_F_HAL_880.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/THC_03_F_HAL_880.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/THC_03_F_HAL_880.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/THC_03_F_HAL_880.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/THC_03_F_HAL_880.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/THC_03_F_HAL_880.clustS.gz') 2016-10-03 10:01:41,274 pid=4262 [jointestimate.py] ERROR sample SPE_24-F_HAL_335 did not finish 2016-10-03 10:01:41,274 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPE_24-F_HAL_335.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPE_24-F_HAL_335.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPE_24-F_HAL_335.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPE_24-F_HAL_335.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPE_24-F_HAL_335.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPE_24-F_HAL_335.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPE_24-F_HAL_335.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPE_24-F_HAL_335.clustS.gz') 2016-10-03 10:01:41,275 pid=4262 [jointestimate.py] ERROR sample BEE_01-F_HAL_448 did not finish 2016-10-03 10:01:41,275 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BEE_01-F_HAL_448.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BEE_01-F_HAL_448.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BEE_01-F_HAL_448.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BEE_01-F_HAL_448.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BEE_01-F_HAL_448.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BEE_01-F_HAL_448.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BEE_01-F_HAL_448.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BEE_01-F_HAL_448.clustS.gz') 2016-10-03 10:01:41,275 pid=4262 [jointestimate.py] ERROR sample LAR_02-F_FIL_465 did not finish 2016-10-03 10:01:41,275 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/LAR_02-F_FIL_465.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/LAR_02-F_FIL_465.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/LAR_02-F_FIL_465.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/LAR_02-F_FIL_465.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/LAR_02-F_FIL_465.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/LAR_02-F_FIL_465.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/LAR_02-F_FIL_465.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/LAR_02-F_FIL_465.clustS.gz') 2016-10-03 10:01:41,276 pid=4262 [jointestimate.py] ERROR sample BEX_04_F_HAL_765 did not finish 2016-10-03 10:01:41,278 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/BEX_04_F_HAL_765.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/BEX_04_F_HAL_765.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/BEX_04_F_HAL_765.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/BEX_04_F_HAL_765.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/BEX_04_F_HAL_765.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/BEX_04_F_HAL_765.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/BEX_04_F_HAL_765.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/BEX_04_F_HAL_765.clustS.gz') 2016-10-03 10:01:41,284 pid=4262 [jointestimate.py] ERROR sample HAR_06_F_FIL_714 did not finish 2016-10-03 10:01:41,284 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/HAR_06_F_FIL_714.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/HAR_06_F_FIL_714.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/HAR_06_F_FIL_714.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/HAR_06_F_FIL_714.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/HAR_06_F_FIL_714.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/HAR_06_F_FIL_714.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/HAR_06_F_FIL_714.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/HAR_06_F_FIL_714.clustS.gz') 2016-10-03 10:01:41,284 pid=4262 [jointestimate.py] ERROR sample SRG_03-F_HAL_397 did not finish 2016-10-03 10:01:41,284 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SRG_03-F_HAL_397.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SRG_03-F_HAL_397.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SRG_03-F_HAL_397.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SRG_03-F_HAL_397.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SRG_03-F_HAL_397.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SRG_03-F_HAL_397.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SRG_03-F_HAL_397.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SRG_03-F_HAL_397.clustS.gz') 2016-10-03 10:01:41,284 pid=4262 [jointestimate.py] ERROR sample SCG_02-F_HAL_391 did not finish 2016-10-03 10:01:41,285 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SCG_02-F_HAL_391.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SCG_02-F_HAL_391.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SCG_02-F_HAL_391.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SCG_02-F_HAL_391.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SCG_02-F_HAL_391.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SCG_02-F_HAL_391.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SCG_02-F_HAL_391.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SCG_02-F_HAL_391.clustS.gz') 2016-10-03 10:01:41,291 pid=4262 [jointestimate.py] ERROR sample SAP_00_F_HAL_591 did not finish 2016-10-03 10:01:41,291 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SAP_00_F_HAL_591.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SAP_00_F_HAL_591.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SAP_00_F_HAL_591.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SAP_00_F_HAL_591.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SAP_00_F_HAL_591.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SAP_00_F_HAL_591.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SAP_00_F_HAL_591.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SAP_00_F_HAL_591.clustS.gz') 2016-10-03 10:01:41,291 pid=4262 [jointestimate.py] ERROR sample CHA_02-G2_HAL_059 did not finish 2016-10-03 10:01:41,292 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_02-G2_HAL_059.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_02-G2_HAL_059.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_02-G2_HAL_059.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_02-G2_HAL_059.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_02-G2_HAL_059.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_02-G2_HAL_059.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_02-G2_HAL_059.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_02-G2_HAL_059.clustS.gz') 2016-10-03 10:01:41,292 pid=4262 [jointestimate.py] ERROR sample ELG_56-G2_HAL_137 did not finish 2016-10-03 10:01:41,292 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ELG_56-G2_HAL_137.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ELG_56-G2_HAL_137.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ELG_56-G2_HAL_137.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ELG_56-G2_HAL_137.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ELG_56-G2_HAL_137.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ELG_56-G2_HAL_137.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ELG_56-G2_HAL_137.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ELG_56-G2_HAL_137.clustS.gz') 2016-10-03 10:01:41,293 pid=4262 [jointestimate.py] ERROR sample GIL_08-F_HAL_154 did not finish 2016-10-03 10:01:41,293 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GIL_08-F_HAL_154.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GIL_08-F_HAL_154.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GIL_08-F_HAL_154.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GIL_08-F_HAL_154.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GIL_08-F_HAL_154.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GIL_08-F_HAL_154.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GIL_08-F_HAL_154.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GIL_08-F_HAL_154.clustS.gz') 2016-10-03 10:01:41,293 pid=4262 [jointestimate.py] ERROR sample ART_07-F_HAL_021 did not finish 2016-10-03 10:01:41,293 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ART_07-F_HAL_021.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ART_07-F_HAL_021.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ART_07-F_HAL_021.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ART_07-F_HAL_021.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ART_07-F_HAL_021.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ART_07-F_HAL_021.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ART_07-F_HAL_021.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ART_07-F_HAL_021.clustS.gz') 2016-10-03 10:01:41,293 pid=4262 [jointestimate.py] ERROR sample COL_15_F_HAL_678 did not finish 2016-10-03 10:01:41,294 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/COL_15_F_HAL_678.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/COL_15_F_HAL_678.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/COL_15_F_HAL_678.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/COL_15_F_HAL_678.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/COL_15_F_HAL_678.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/COL_15_F_HAL_678.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/COL_15_F_HAL_678.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/COL_15_F_HAL_678.clustS.gz') 2016-10-03 10:01:41,294 pid=4262 [jointestimate.py] ERROR sample SPE_21-F_HAL_332 did not finish 2016-10-03 10:01:41,294 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPE_21-F_HAL_332.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPE_21-F_HAL_332.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPE_21-F_HAL_332.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPE_21-F_HAL_332.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPE_21-F_HAL_332.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPE_21-F_HAL_332.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPE_21-F_HAL_332.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPE_21-F_HAL_332.clustS.gz') 2016-10-03 10:01:41,294 pid=4262 [jointestimate.py] ERROR sample CBS_01-F_HAL_433 did not finish 2016-10-03 10:01:41,295 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CBS_01-F_HAL_433.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CBS_01-F_HAL_433.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CBS_01-F_HAL_433.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CBS_01-F_HAL_433.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CBS_01-F_HAL_433.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CBS_01-F_HAL_433.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CBS_01-F_HAL_433.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CBS_01-F_HAL_433.clustS.gz') 2016-10-03 10:01:41,295 pid=4262 [jointestimate.py] ERROR sample CNF_01-G1_HAL_084 did not finish 2016-10-03 10:01:41,295 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CNF_01-G1_HAL_084.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CNF_01-G1_HAL_084.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CNF_01-G1_HAL_084.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CNF_01-G1_HAL_084.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CNF_01-G1_HAL_084.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CNF_01-G1_HAL_084.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CNF_01-G1_HAL_084.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/CNF_01-G1_HAL_084.clustS.gz') 2016-10-03 10:01:41,295 pid=4262 [jointestimate.py] ERROR sample SCG_01-F_HAL_390 did not finish 2016-10-03 10:01:41,295 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SCG_01-F_HAL_390.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SCG_01-F_HAL_390.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SCG_01-F_HAL_390.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SCG_01-F_HAL_390.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SCG_01-F_HAL_390.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SCG_01-F_HAL_390.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SCG_01-F_HAL_390.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SCG_01-F_HAL_390.clustS.gz') 2016-10-03 10:01:41,296 pid=4262 [jointestimate.py] ERROR sample CCL_06-F_HAL_054 did not finish 2016-10-03 10:01:41,296 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CCL_06-F_HAL_054.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CCL_06-F_HAL_054.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CCL_06-F_HAL_054.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CCL_06-F_HAL_054.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CCL_06-F_HAL_054.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CCL_06-F_HAL_054.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CCL_06-F_HAL_054.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CCL_06-F_HAL_054.clustS.gz') 2016-10-03 10:01:41,296 pid=4262 [jointestimate.py] ERROR sample DUV_02-F_HAL_457 did not finish 2016-10-03 10:01:41,296 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/DUV_02-F_HAL_457.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/DUV_02-F_HAL_457.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/DUV_02-F_HAL_457.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/DUV_02-F_HAL_457.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/DUV_02-F_HAL_457.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/DUV_02-F_HAL_457.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/DUV_02-F_HAL_457.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/DUV_02-F_HAL_457.clustS.gz') 2016-10-03 10:01:41,296 pid=4262 [jointestimate.py] ERROR sample PDB_02-G1_HAL_242 did not finish 2016-10-03 10:01:41,297 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PDB_02-G1_HAL_242.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PDB_02-G1_HAL_242.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PDB_02-G1_HAL_242.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PDB_02-G1_HAL_242.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PDB_02-G1_HAL_242.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PDB_02-G1_HAL_242.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PDB_02-G1_HAL_242.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/PDB_02-G1_HAL_242.clustS.gz') 2016-10-03 10:01:41,297 pid=4262 [jointestimate.py] ERROR sample SRG_01-F_HAL_395 did not finish 2016-10-03 10:01:41,297 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SRG_01-F_HAL_395.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SRG_01-F_HAL_395.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SRG_01-F_HAL_395.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SRG_01-F_HAL_395.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SRG_01-F_HAL_395.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SRG_01-F_HAL_395.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SRG_01-F_HAL_395.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SRG_01-F_HAL_395.clustS.gz') 2016-10-03 10:01:41,799 pid=4262 [jointestimate.py] ERROR sample CBS_05-F_HAL_434 did not finish 2016-10-03 10:01:41,799 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CBS_05-F_HAL_434.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CBS_05-F_HAL_434.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CBS_05-F_HAL_434.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CBS_05-F_HAL_434.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CBS_05-F_HAL_434.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CBS_05-F_HAL_434.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CBS_05-F_HAL_434.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CBS_05-F_HAL_434.clustS.gz') 2016-10-03 10:01:41,800 pid=4262 [jointestimate.py] ERROR sample CLA_01B-G1_HAL_076 did not finish 2016-10-03 10:01:41,800 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CLA_01B-G1_HAL_076.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CLA_01B-G1_HAL_076.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CLA_01B-G1_HAL_076.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CLA_01B-G1_HAL_076.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CLA_01B-G1_HAL_076.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CLA_01B-G1_HAL_076.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CLA_01B-G1_HAL_076.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CLA_01B-G1_HAL_076.clustS.gz') 2016-10-03 10:01:41,802 pid=4262 [jointestimate.py] ERROR sample SPE_22-F_HAL_333 did not finish 2016-10-03 10:01:41,802 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPE_22-F_HAL_333.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPE_22-F_HAL_333.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPE_22-F_HAL_333.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPE_22-F_HAL_333.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPE_22-F_HAL_333.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPE_22-F_HAL_333.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPE_22-F_HAL_333.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPE_22-F_HAL_333.clustS.gz') 2016-10-03 10:01:41,803 pid=4262 [jointestimate.py] ERROR sample SPE_32-F_HAL_342 did not finish 2016-10-03 10:01:41,803 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SPE_32-F_HAL_342.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SPE_32-F_HAL_342.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SPE_32-F_HAL_342.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SPE_32-F_HAL_342.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SPE_32-F_HAL_342.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SPE_32-F_HAL_342.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SPE_32-F_HAL_342.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SPE_32-F_HAL_342.clustS.gz') 2016-10-03 10:01:41,804 pid=4262 [jointestimate.py] ERROR sample KER_05_F_HAL_755 did not finish 2016-10-03 10:01:41,804 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/KER_05_F_HAL_755.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/KER_05_F_HAL_755.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/KER_05_F_HAL_755.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/KER_05_F_HAL_755.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/KER_05_F_HAL_755.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/KER_05_F_HAL_755.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/KER_05_F_HAL_755.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/KER_05_F_HAL_755.clustS.gz') 2016-10-03 10:01:41,804 pid=4262 [jointestimate.py] ERROR sample UVA_01-F_HAL_463 did not finish 2016-10-03 10:01:41,805 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/UVA_01-F_HAL_463.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/UVA_01-F_HAL_463.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/UVA_01-F_HAL_463.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/UVA_01-F_HAL_463.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/UVA_01-F_HAL_463.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/UVA_01-F_HAL_463.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/UVA_01-F_HAL_463.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/UVA_01-F_HAL_463.clustS.gz') 2016-10-03 10:01:41,806 pid=4262 [jointestimate.py] ERROR sample DRB_01-G3_HAL_121 did not finish 2016-10-03 10:01:41,806 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/DRB_01-G3_HAL_121.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/DRB_01-G3_HAL_121.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/DRB_01-G3_HAL_121.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/DRB_01-G3_HAL_121.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/DRB_01-G3_HAL_121.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/DRB_01-G3_HAL_121.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/DRB_01-G3_HAL_121.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/DRB_01-G3_HAL_121.clustS.gz') 2016-10-03 10:01:41,807 pid=4262 [jointestimate.py] ERROR sample SLS_08-G1_HAL_314 did not finish 2016-10-03 10:01:41,807 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SLS_08-G1_HAL_314.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SLS_08-G1_HAL_314.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SLS_08-G1_HAL_314.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SLS_08-G1_HAL_314.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SLS_08-G1_HAL_314.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SLS_08-G1_HAL_314.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SLS_08-G1_HAL_314.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SLS_08-G1_HAL_314.clustS.gz') 2016-10-03 10:01:42,308 pid=4262 [jointestimate.py] ERROR sample FIL_01_2-G1_FIL_142 did not finish 2016-10-03 10:01:42,308 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/FIL_01_2-G1_FIL_142.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/FIL_01_2-G1_FIL_142.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/FIL_01_2-G1_FIL_142.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/FIL_01_2-G1_FIL_142.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/FIL_01_2-G1_FIL_142.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/FIL_01_2-G1_FIL_142.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/FIL_01_2-G1_FIL_142.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/FIL_01_2-G1_FIL_142.clustS.gz') 2016-10-03 10:01:42,309 pid=4262 [jointestimate.py] ERROR sample BEE_01A_2-G2_HAL_029 did not finish 2016-10-03 10:01:42,309 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/BEE_01A_2-G2_HAL_029.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/BEE_01A_2-G2_HAL_029.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/BEE_01A_2-G2_HAL_029.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/BEE_01A_2-G2_HAL_029.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/BEE_01A_2-G2_HAL_029.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/BEE_01A_2-G2_HAL_029.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/BEE_01A_2-G2_HAL_029.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/BEE_01A_2-G2_HAL_029.clustS.gz') 2016-10-03 10:01:42,309 pid=4262 [jointestimate.py] ERROR sample ATC_17_F_FIL_840 did not finish 2016-10-03 10:01:42,309 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ATC_17_F_FIL_840.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ATC_17_F_FIL_840.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ATC_17_F_FIL_840.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ATC_17_F_FIL_840.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ATC_17_F_FIL_840.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ATC_17_F_FIL_840.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ATC_17_F_FIL_840.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ATC_17_F_FIL_840.clustS.gz') 2016-10-03 10:01:42,310 pid=4262 [jointestimate.py] ERROR sample COL_19_F_HAL_681 did not finish 2016-10-03 10:01:42,310 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/COL_19_F_HAL_681.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/COL_19_F_HAL_681.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/COL_19_F_HAL_681.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/COL_19_F_HAL_681.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/COL_19_F_HAL_681.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/COL_19_F_HAL_681.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/COL_19_F_HAL_681.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/COL_19_F_HAL_681.clustS.gz') 2016-10-03 10:01:42,311 pid=4262 [jointestimate.py] ERROR sample ELG_13-F_HAL_134 did not finish 2016-10-03 10:01:42,311 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_13-F_HAL_134.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_13-F_HAL_134.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_13-F_HAL_134.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_13-F_HAL_134.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_13-F_HAL_134.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_13-F_HAL_134.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_13-F_HAL_134.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_13-F_HAL_134.clustS.gz') 2016-10-03 10:01:42,311 pid=4262 [jointestimate.py] ERROR sample SEP_05-F_HAL_473 did not finish 2016-10-03 10:01:42,311 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SEP_05-F_HAL_473.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SEP_05-F_HAL_473.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SEP_05-F_HAL_473.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SEP_05-F_HAL_473.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SEP_05-F_HAL_473.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SEP_05-F_HAL_473.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SEP_05-F_HAL_473.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SEP_05-F_HAL_473.clustS.gz') 2016-10-03 10:01:42,312 pid=4262 [jointestimate.py] ERROR sample ART_11-F_HAL_025 did not finish 2016-10-03 10:01:42,312 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ART_11-F_HAL_025.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ART_11-F_HAL_025.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ART_11-F_HAL_025.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ART_11-F_HAL_025.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ART_11-F_HAL_025.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ART_11-F_HAL_025.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ART_11-F_HAL_025.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ART_11-F_HAL_025.clustS.gz') 2016-10-03 10:01:42,312 pid=4262 [jointestimate.py] ERROR sample CLD_01-G1_HAL_077 did not finish 2016-10-03 10:01:42,313 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CLD_01-G1_HAL_077.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CLD_01-G1_HAL_077.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CLD_01-G1_HAL_077.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CLD_01-G1_HAL_077.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CLD_01-G1_HAL_077.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CLD_01-G1_HAL_077.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CLD_01-G1_HAL_077.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CLD_01-G1_HAL_077.clustS.gz') 2016-10-03 10:01:42,314 pid=4262 [jointestimate.py] ERROR sample LBY_04-F_HAL_196 did not finish 2016-10-03 10:01:42,314 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/LBY_04-F_HAL_196.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/LBY_04-F_HAL_196.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/LBY_04-F_HAL_196.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/LBY_04-F_HAL_196.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/LBY_04-F_HAL_196.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/LBY_04-F_HAL_196.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/LBY_04-F_HAL_196.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/LBY_04-F_HAL_196.clustS.gz') 2016-10-03 10:01:42,314 pid=4262 [jointestimate.py] ERROR sample ART_01-G1_HAL_017 did not finish 2016-10-03 10:01:42,315 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/ART_01-G1_HAL_017.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/ART_01-G1_HAL_017.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/ART_01-G1_HAL_017.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/ART_01-G1_HAL_017.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/ART_01-G1_HAL_017.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/ART_01-G1_HAL_017.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/ART_01-G1_HAL_017.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/ART_01-G1_HAL_017.clustS.gz') 2016-10-03 10:01:42,315 pid=4262 [jointestimate.py] ERROR sample JHC_06-G1_HAL_188 did not finish 2016-10-03 10:01:42,315 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/JHC_06-G1_HAL_188.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/JHC_06-G1_HAL_188.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/JHC_06-G1_HAL_188.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/JHC_06-G1_HAL_188.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/JHC_06-G1_HAL_188.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/JHC_06-G1_HAL_188.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/JHC_06-G1_HAL_188.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/JHC_06-G1_HAL_188.clustS.gz') 2016-10-03 10:01:42,316 pid=4262 [jointestimate.py] ERROR sample SEV_09-F_HAL_296 did not finish 2016-10-03 10:01:42,316 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SEV_09-F_HAL_296.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SEV_09-F_HAL_296.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SEV_09-F_HAL_296.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SEV_09-F_HAL_296.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SEV_09-F_HAL_296.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SEV_09-F_HAL_296.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SEV_09-F_HAL_296.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SEV_09-F_HAL_296.clustS.gz') 2016-10-03 10:01:42,316 pid=4262 [jointestimate.py] ERROR sample SPJ_02-G1_HAL_350 did not finish 2016-10-03 10:01:42,316 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SPJ_02-G1_HAL_350.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SPJ_02-G1_HAL_350.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SPJ_02-G1_HAL_350.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SPJ_02-G1_HAL_350.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SPJ_02-G1_HAL_350.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SPJ_02-G1_HAL_350.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SPJ_02-G1_HAL_350.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SPJ_02-G1_HAL_350.clustS.gz') 2016-10-03 10:01:42,316 pid=4262 [jointestimate.py] ERROR sample BUS_07-G1_HAL_042 did not finish 2016-10-03 10:01:42,317 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BUS_07-G1_HAL_042.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BUS_07-G1_HAL_042.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BUS_07-G1_HAL_042.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BUS_07-G1_HAL_042.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BUS_07-G1_HAL_042.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BUS_07-G1_HAL_042.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BUS_07-G1_HAL_042.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BUS_07-G1_HAL_042.clustS.gz') 2016-10-03 10:01:42,317 pid=4262 [jointestimate.py] ERROR sample CAM_03-F_FIL_444 did not finish 2016-10-03 10:01:42,317 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CAM_03-F_FIL_444.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CAM_03-F_FIL_444.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CAM_03-F_FIL_444.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CAM_03-F_FIL_444.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CAM_03-F_FIL_444.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CAM_03-F_FIL_444.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CAM_03-F_FIL_444.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CAM_03-F_FIL_444.clustS.gz') 2016-10-03 10:01:42,317 pid=4262 [jointestimate.py] ERROR sample SEV_06-F_HAL_293 did not finish 2016-10-03 10:01:42,317 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_06-F_HAL_293.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_06-F_HAL_293.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_06-F_HAL_293.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_06-F_HAL_293.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_06-F_HAL_293.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_06-F_HAL_293.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_06-F_HAL_293.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_06-F_HAL_293.clustS.gz') 2016-10-03 10:01:42,819 pid=4262 [jointestimate.py] ERROR sample ESE_01-G1_HAL_139 did not finish 2016-10-03 10:01:42,819 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ESE_01-G1_HAL_139.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ESE_01-G1_HAL_139.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ESE_01-G1_HAL_139.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ESE_01-G1_HAL_139.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ESE_01-G1_HAL_139.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ESE_01-G1_HAL_139.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ESE_01-G1_HAL_139.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ESE_01-G1_HAL_139.clustS.gz') 2016-10-03 10:01:42,819 pid=4262 [jointestimate.py] ERROR sample GIL_17-G1_HAL_162 did not finish 2016-10-03 10:01:42,819 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_17-G1_HAL_162.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_17-G1_HAL_162.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_17-G1_HAL_162.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_17-G1_HAL_162.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_17-G1_HAL_162.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_17-G1_HAL_162.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_17-G1_HAL_162.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_17-G1_HAL_162.clustS.gz') 2016-10-03 10:01:42,821 pid=4262 [jointestimate.py] ERROR sample ELG_52-G1_HAL_136 did not finish 2016-10-03 10:01:42,821 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ELG_52-G1_HAL_136.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ELG_52-G1_HAL_136.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ELG_52-G1_HAL_136.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ELG_52-G1_HAL_136.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ELG_52-G1_HAL_136.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ELG_52-G1_HAL_136.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ELG_52-G1_HAL_136.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ELG_52-G1_HAL_136.clustS.gz') 2016-10-03 10:01:42,822 pid=4262 [jointestimate.py] ERROR sample DOF_09A-G2_HAL_117 did not finish 2016-10-03 10:01:42,822 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_09A-G2_HAL_117.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_09A-G2_HAL_117.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_09A-G2_HAL_117.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_09A-G2_HAL_117.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_09A-G2_HAL_117.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_09A-G2_HAL_117.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_09A-G2_HAL_117.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_09A-G2_HAL_117.clustS.gz') 2016-10-03 10:01:42,823 pid=4262 [jointestimate.py] ERROR sample ART_10-F_HAL_024 did not finish 2016-10-03 10:01:42,823 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ART_10-F_HAL_024.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ART_10-F_HAL_024.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ART_10-F_HAL_024.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ART_10-F_HAL_024.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ART_10-F_HAL_024.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ART_10-F_HAL_024.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ART_10-F_HAL_024.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ART_10-F_HAL_024.clustS.gz') 2016-10-03 10:01:42,824 pid=4262 [jointestimate.py] ERROR sample ERO_03_F_HAL_509 did not finish 2016-10-03 10:01:42,824 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ERO_03_F_HAL_509.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ERO_03_F_HAL_509.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ERO_03_F_HAL_509.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ERO_03_F_HAL_509.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ERO_03_F_HAL_509.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ERO_03_F_HAL_509.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ERO_03_F_HAL_509.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ERO_03_F_HAL_509.clustS.gz') 2016-10-03 10:01:42,826 pid=4262 [jointestimate.py] ERROR sample LAR_01B_2-G1_FIL_193 did not finish 2016-10-03 10:01:42,826 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/LAR_01B_2-G1_FIL_193.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/LAR_01B_2-G1_FIL_193.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/LAR_01B_2-G1_FIL_193.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/LAR_01B_2-G1_FIL_193.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/LAR_01B_2-G1_FIL_193.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/LAR_01B_2-G1_FIL_193.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/LAR_01B_2-G1_FIL_193.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/LAR_01B_2-G1_FIL_193.clustS.gz') 2016-10-03 10:01:43,329 pid=4262 [jointestimate.py] ERROR sample COR_03-G1_HAL_092 did not finish 2016-10-03 10:01:43,329 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/COR_03-G1_HAL_092.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/COR_03-G1_HAL_092.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/COR_03-G1_HAL_092.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/COR_03-G1_HAL_092.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/COR_03-G1_HAL_092.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/COR_03-G1_HAL_092.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/COR_03-G1_HAL_092.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/COR_03-G1_HAL_092.clustS.gz') 2016-10-03 10:01:43,330 pid=4262 [jointestimate.py] ERROR sample HWY_05-G1_HAL_184 did not finish 2016-10-03 10:01:43,330 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HWY_05-G1_HAL_184.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HWY_05-G1_HAL_184.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HWY_05-G1_HAL_184.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HWY_05-G1_HAL_184.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HWY_05-G1_HAL_184.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HWY_05-G1_HAL_184.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HWY_05-G1_HAL_184.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HWY_05-G1_HAL_184.clustS.gz') 2016-10-03 10:01:43,330 pid=4262 [jointestimate.py] ERROR sample CCG_05-G2_HAL_048 did not finish 2016-10-03 10:01:43,331 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CCG_05-G2_HAL_048.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CCG_05-G2_HAL_048.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CCG_05-G2_HAL_048.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CCG_05-G2_HAL_048.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CCG_05-G2_HAL_048.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CCG_05-G2_HAL_048.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CCG_05-G2_HAL_048.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CCG_05-G2_HAL_048.clustS.gz') 2016-10-03 10:01:43,331 pid=4262 [jointestimate.py] ERROR sample HWY_02-G1_HAL_181 did not finish 2016-10-03 10:01:43,331 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/HWY_02-G1_HAL_181.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/HWY_02-G1_HAL_181.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/HWY_02-G1_HAL_181.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/HWY_02-G1_HAL_181.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/HWY_02-G1_HAL_181.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/HWY_02-G1_HAL_181.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/HWY_02-G1_HAL_181.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/HWY_02-G1_HAL_181.clustS.gz') 2016-10-03 10:01:43,332 pid=4262 [jointestimate.py] ERROR sample EPS_01A-G1_FIL_138 did not finish 2016-10-03 10:01:43,332 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/EPS_01A-G1_FIL_138.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/EPS_01A-G1_FIL_138.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/EPS_01A-G1_FIL_138.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/EPS_01A-G1_FIL_138.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/EPS_01A-G1_FIL_138.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/EPS_01A-G1_FIL_138.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/EPS_01A-G1_FIL_138.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/EPS_01A-G1_FIL_138.clustS.gz') 2016-10-03 10:01:43,333 pid=4262 [jointestimate.py] ERROR sample ELG_11-F_HAL_132 did not finish 2016-10-03 10:01:43,333 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ELG_11-F_HAL_132.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ELG_11-F_HAL_132.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ELG_11-F_HAL_132.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ELG_11-F_HAL_132.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ELG_11-F_HAL_132.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ELG_11-F_HAL_132.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ELG_11-F_HAL_132.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ELG_11-F_HAL_132.clustS.gz') 2016-10-03 10:01:43,333 pid=4262 [jointestimate.py] ERROR sample PCR_13-F_HAL_234 did not finish 2016-10-03 10:01:43,333 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/PCR_13-F_HAL_234.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/PCR_13-F_HAL_234.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/PCR_13-F_HAL_234.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/PCR_13-F_HAL_234.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/PCR_13-F_HAL_234.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/PCR_13-F_HAL_234.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/PCR_13-F_HAL_234.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/PCR_13-F_HAL_234.clustS.gz') 2016-10-03 10:01:43,340 pid=4262 [jointestimate.py] ERROR sample PDB_06-G1_HAL_246 did not finish 2016-10-03 10:01:43,340 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDB_06-G1_HAL_246.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDB_06-G1_HAL_246.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDB_06-G1_HAL_246.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDB_06-G1_HAL_246.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDB_06-G1_HAL_246.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDB_06-G1_HAL_246.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDB_06-G1_HAL_246.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/PDB_06-G1_HAL_246.clustS.gz') 2016-10-03 10:01:43,341 pid=4262 [jointestimate.py] ERROR sample GIL_21-G1_HAL_166 did not finish 2016-10-03 10:01:43,341 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GIL_21-G1_HAL_166.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GIL_21-G1_HAL_166.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GIL_21-G1_HAL_166.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GIL_21-G1_HAL_166.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GIL_21-G1_HAL_166.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GIL_21-G1_HAL_166.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GIL_21-G1_HAL_166.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/GIL_21-G1_HAL_166.clustS.gz') 2016-10-03 10:01:43,341 pid=4262 [jointestimate.py] ERROR sample DRB_07-G1_HAL_122 did not finish 2016-10-03 10:01:43,342 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/DRB_07-G1_HAL_122.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/DRB_07-G1_HAL_122.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/DRB_07-G1_HAL_122.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/DRB_07-G1_HAL_122.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/DRB_07-G1_HAL_122.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/DRB_07-G1_HAL_122.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/DRB_07-G1_HAL_122.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/DRB_07-G1_HAL_122.clustS.gz') 2016-10-03 10:01:43,342 pid=4262 [jointestimate.py] ERROR sample SVN_02-F_HAL_364 did not finish 2016-10-03 10:01:43,342 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SVN_02-F_HAL_364.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SVN_02-F_HAL_364.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SVN_02-F_HAL_364.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SVN_02-F_HAL_364.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SVN_02-F_HAL_364.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SVN_02-F_HAL_364.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SVN_02-F_HAL_364.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SVN_02-F_HAL_364.clustS.gz') 2016-10-03 10:01:43,343 pid=4262 [jointestimate.py] ERROR sample CBS_08-F_HAL_436 did not finish 2016-10-03 10:01:43,343 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CBS_08-F_HAL_436.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CBS_08-F_HAL_436.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CBS_08-F_HAL_436.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CBS_08-F_HAL_436.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CBS_08-F_HAL_436.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CBS_08-F_HAL_436.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CBS_08-F_HAL_436.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CBS_08-F_HAL_436.clustS.gz') 2016-10-03 10:01:43,844 pid=4262 [jointestimate.py] ERROR sample FIL_03-G1_FIL_144 did not finish 2016-10-03 10:01:43,845 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/FIL_03-G1_FIL_144.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/FIL_03-G1_FIL_144.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/FIL_03-G1_FIL_144.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/FIL_03-G1_FIL_144.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/FIL_03-G1_FIL_144.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/FIL_03-G1_FIL_144.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/FIL_03-G1_FIL_144.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/FIL_03-G1_FIL_144.clustS.gz') 2016-10-03 10:01:43,846 pid=4262 [jointestimate.py] ERROR sample TWC_05_F_HAL_672 did not finish 2016-10-03 10:01:43,846 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TWC_05_F_HAL_672.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TWC_05_F_HAL_672.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TWC_05_F_HAL_672.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TWC_05_F_HAL_672.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TWC_05_F_HAL_672.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TWC_05_F_HAL_672.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TWC_05_F_HAL_672.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/TWC_05_F_HAL_672.clustS.gz') 2016-10-03 10:01:43,846 pid=4262 [jointestimate.py] ERROR sample SEV_07-F_HAL_294 did not finish 2016-10-03 10:01:43,846 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_07-F_HAL_294.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_07-F_HAL_294.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_07-F_HAL_294.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_07-F_HAL_294.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_07-F_HAL_294.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_07-F_HAL_294.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_07-F_HAL_294.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SEV_07-F_HAL_294.clustS.gz') 2016-10-03 10:01:43,847 pid=4262 [jointestimate.py] ERROR sample AWR_02_2-G1_FIL_028 did not finish 2016-10-03 10:01:43,847 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/AWR_02_2-G1_FIL_028.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/AWR_02_2-G1_FIL_028.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/AWR_02_2-G1_FIL_028.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/AWR_02_2-G1_FIL_028.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/AWR_02_2-G1_FIL_028.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/AWR_02_2-G1_FIL_028.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/AWR_02_2-G1_FIL_028.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/AWR_02_2-G1_FIL_028.clustS.gz') 2016-10-03 10:01:43,848 pid=4262 [jointestimate.py] ERROR sample DRB_08-F_HAL_123 did not finish 2016-10-03 10:01:43,848 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/DRB_08-F_HAL_123.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/DRB_08-F_HAL_123.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/DRB_08-F_HAL_123.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/DRB_08-F_HAL_123.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/DRB_08-F_HAL_123.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/DRB_08-F_HAL_123.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/DRB_08-F_HAL_123.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/DRB_08-F_HAL_123.clustS.gz') 2016-10-03 10:01:43,848 pid=4262 [jointestimate.py] ERROR sample SPJ_03-G1_HAL_351 did not finish 2016-10-03 10:01:43,848 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_03-G1_HAL_351.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_03-G1_HAL_351.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_03-G1_HAL_351.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_03-G1_HAL_351.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_03-G1_HAL_351.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_03-G1_HAL_351.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_03-G1_HAL_351.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_03-G1_HAL_351.clustS.gz') 2016-10-03 10:01:43,848 pid=4262 [jointestimate.py] ERROR sample LME_04-G1_HAL_204 did not finish 2016-10-03 10:01:43,849 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/LME_04-G1_HAL_204.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/LME_04-G1_HAL_204.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/LME_04-G1_HAL_204.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/LME_04-G1_HAL_204.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/LME_04-G1_HAL_204.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/LME_04-G1_HAL_204.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/LME_04-G1_HAL_204.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/LME_04-G1_HAL_204.clustS.gz') 2016-10-03 10:01:43,849 pid=4262 [jointestimate.py] ERROR sample FIL_08-F_FIL_441 did not finish 2016-10-03 10:01:43,849 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/FIL_08-F_FIL_441.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/FIL_08-F_FIL_441.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/FIL_08-F_FIL_441.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/FIL_08-F_FIL_441.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/FIL_08-F_FIL_441.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/FIL_08-F_FIL_441.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/FIL_08-F_FIL_441.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/FIL_08-F_FIL_441.clustS.gz') 2016-10-03 10:01:43,850 pid=4262 [jointestimate.py] ERROR sample GIL_15-G1_HAL_160 did not finish 2016-10-03 10:01:43,850 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GIL_15-G1_HAL_160.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GIL_15-G1_HAL_160.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GIL_15-G1_HAL_160.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GIL_15-G1_HAL_160.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GIL_15-G1_HAL_160.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GIL_15-G1_HAL_160.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GIL_15-G1_HAL_160.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GIL_15-G1_HAL_160.clustS.gz') 2016-10-03 10:01:43,850 pid=4262 [jointestimate.py] ERROR sample MCR_51-F_HAL_214 did not finish 2016-10-03 10:01:43,851 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MCR_51-F_HAL_214.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MCR_51-F_HAL_214.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MCR_51-F_HAL_214.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MCR_51-F_HAL_214.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MCR_51-F_HAL_214.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MCR_51-F_HAL_214.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MCR_51-F_HAL_214.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MCR_51-F_HAL_214.clustS.gz') 2016-10-03 10:01:43,852 pid=4262 [jointestimate.py] ERROR sample DUV_03-F_HAL_458 did not finish 2016-10-03 10:01:43,852 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/DUV_03-F_HAL_458.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/DUV_03-F_HAL_458.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/DUV_03-F_HAL_458.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/DUV_03-F_HAL_458.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/DUV_03-F_HAL_458.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/DUV_03-F_HAL_458.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/DUV_03-F_HAL_458.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/DUV_03-F_HAL_458.clustS.gz') 2016-10-03 10:01:44,355 pid=4262 [jointestimate.py] ERROR sample SEP_06-F_HAL_474 did not finish 2016-10-03 10:01:44,355 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SEP_06-F_HAL_474.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SEP_06-F_HAL_474.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SEP_06-F_HAL_474.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SEP_06-F_HAL_474.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SEP_06-F_HAL_474.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SEP_06-F_HAL_474.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SEP_06-F_HAL_474.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SEP_06-F_HAL_474.clustS.gz') 2016-10-03 10:01:44,356 pid=4262 [jointestimate.py] ERROR sample GNZ_34-F_HAL_496 did not finish 2016-10-03 10:01:44,356 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GNZ_34-F_HAL_496.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GNZ_34-F_HAL_496.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GNZ_34-F_HAL_496.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GNZ_34-F_HAL_496.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GNZ_34-F_HAL_496.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GNZ_34-F_HAL_496.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GNZ_34-F_HAL_496.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GNZ_34-F_HAL_496.clustS.gz') 2016-10-03 10:01:44,357 pid=4262 [jointestimate.py] ERROR sample GIL_07-G1_HAL_153 did not finish 2016-10-03 10:01:44,357 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GIL_07-G1_HAL_153.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GIL_07-G1_HAL_153.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GIL_07-G1_HAL_153.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GIL_07-G1_HAL_153.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GIL_07-G1_HAL_153.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GIL_07-G1_HAL_153.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GIL_07-G1_HAL_153.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/GIL_07-G1_HAL_153.clustS.gz') 2016-10-03 10:01:44,359 pid=4262 [jointestimate.py] ERROR sample DRB_17-G1_HAL_124 did not finish 2016-10-03 10:01:44,359 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/DRB_17-G1_HAL_124.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/DRB_17-G1_HAL_124.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/DRB_17-G1_HAL_124.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/DRB_17-G1_HAL_124.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/DRB_17-G1_HAL_124.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/DRB_17-G1_HAL_124.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/DRB_17-G1_HAL_124.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/DRB_17-G1_HAL_124.clustS.gz') 2016-10-03 10:01:44,359 pid=4262 [jointestimate.py] ERROR sample DOF_18-G1_HAL_120 did not finish 2016-10-03 10:01:44,359 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/DOF_18-G1_HAL_120.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/DOF_18-G1_HAL_120.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/DOF_18-G1_HAL_120.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/DOF_18-G1_HAL_120.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/DOF_18-G1_HAL_120.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/DOF_18-G1_HAL_120.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/DOF_18-G1_HAL_120.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/DOF_18-G1_HAL_120.clustS.gz') 2016-10-03 10:01:44,360 pid=4262 [jointestimate.py] ERROR sample DUV_01-F_HAL_456 did not finish 2016-10-03 10:01:44,360 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/DUV_01-F_HAL_456.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/DUV_01-F_HAL_456.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/DUV_01-F_HAL_456.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/DUV_01-F_HAL_456.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/DUV_01-F_HAL_456.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/DUV_01-F_HAL_456.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/DUV_01-F_HAL_456.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/DUV_01-F_HAL_456.clustS.gz') 2016-10-03 10:01:44,360 pid=4262 [jointestimate.py] ERROR sample LMA_04-G1_HAL_198 did not finish 2016-10-03 10:01:44,360 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/LMA_04-G1_HAL_198.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/LMA_04-G1_HAL_198.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/LMA_04-G1_HAL_198.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/LMA_04-G1_HAL_198.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/LMA_04-G1_HAL_198.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/LMA_04-G1_HAL_198.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/LMA_04-G1_HAL_198.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/LMA_04-G1_HAL_198.clustS.gz') 2016-10-03 10:01:44,863 pid=4262 [jointestimate.py] ERROR sample SPR_30-G2_HAL_354 did not finish 2016-10-03 10:01:44,863 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPR_30-G2_HAL_354.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPR_30-G2_HAL_354.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPR_30-G2_HAL_354.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPR_30-G2_HAL_354.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPR_30-G2_HAL_354.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPR_30-G2_HAL_354.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPR_30-G2_HAL_354.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPR_30-G2_HAL_354.clustS.gz') 2016-10-03 10:01:44,864 pid=4262 [jointestimate.py] ERROR sample SMT_01-G1_HAL_316 did not finish 2016-10-03 10:01:44,864 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SMT_01-G1_HAL_316.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SMT_01-G1_HAL_316.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SMT_01-G1_HAL_316.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SMT_01-G1_HAL_316.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SMT_01-G1_HAL_316.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SMT_01-G1_HAL_316.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SMT_01-G1_HAL_316.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SMT_01-G1_HAL_316.clustS.gz') 2016-10-03 10:01:44,864 pid=4262 [jointestimate.py] ERROR sample SPJ_01-G1_HAL_349 did not finish 2016-10-03 10:01:44,864 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_01-G1_HAL_349.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_01-G1_HAL_349.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_01-G1_HAL_349.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_01-G1_HAL_349.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_01-G1_HAL_349.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_01-G1_HAL_349.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_01-G1_HAL_349.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_01-G1_HAL_349.clustS.gz') 2016-10-03 10:01:44,865 pid=4262 [jointestimate.py] ERROR sample BUS_06-G1_HAL_041 did not finish 2016-10-03 10:01:44,865 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BUS_06-G1_HAL_041.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BUS_06-G1_HAL_041.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BUS_06-G1_HAL_041.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BUS_06-G1_HAL_041.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BUS_06-G1_HAL_041.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BUS_06-G1_HAL_041.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BUS_06-G1_HAL_041.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BUS_06-G1_HAL_041.clustS.gz') 2016-10-03 10:01:44,866 pid=4262 [jointestimate.py] ERROR sample PCR_03-F_HAL_227 did not finish 2016-10-03 10:01:44,866 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PCR_03-F_HAL_227.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PCR_03-F_HAL_227.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PCR_03-F_HAL_227.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PCR_03-F_HAL_227.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PCR_03-F_HAL_227.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PCR_03-F_HAL_227.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PCR_03-F_HAL_227.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PCR_03-F_HAL_227.clustS.gz') 2016-10-03 10:01:44,866 pid=4262 [jointestimate.py] ERROR sample GIL_03-G1_HAL_149 did not finish 2016-10-03 10:01:44,867 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GIL_03-G1_HAL_149.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GIL_03-G1_HAL_149.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GIL_03-G1_HAL_149.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GIL_03-G1_HAL_149.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GIL_03-G1_HAL_149.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GIL_03-G1_HAL_149.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GIL_03-G1_HAL_149.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GIL_03-G1_HAL_149.clustS.gz') 2016-10-03 10:01:44,867 pid=4262 [jointestimate.py] ERROR sample TNK_04-F_HAL_375 did not finish 2016-10-03 10:01:44,867 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TNK_04-F_HAL_375.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TNK_04-F_HAL_375.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TNK_04-F_HAL_375.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TNK_04-F_HAL_375.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TNK_04-F_HAL_375.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TNK_04-F_HAL_375.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TNK_04-F_HAL_375.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/TNK_04-F_HAL_375.clustS.gz') 2016-10-03 10:01:45,369 pid=4262 [jointestimate.py] ERROR sample LME_03-G1_HAL_203 did not finish 2016-10-03 10:01:45,369 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/LME_03-G1_HAL_203.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/LME_03-G1_HAL_203.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/LME_03-G1_HAL_203.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/LME_03-G1_HAL_203.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/LME_03-G1_HAL_203.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/LME_03-G1_HAL_203.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/LME_03-G1_HAL_203.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/LME_03-G1_HAL_203.clustS.gz') 2016-10-03 10:01:45,369 pid=4262 [jointestimate.py] ERROR sample PCR_11-F_HAL_233 did not finish 2016-10-03 10:01:45,369 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PCR_11-F_HAL_233.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PCR_11-F_HAL_233.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PCR_11-F_HAL_233.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PCR_11-F_HAL_233.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PCR_11-F_HAL_233.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PCR_11-F_HAL_233.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PCR_11-F_HAL_233.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PCR_11-F_HAL_233.clustS.gz') 2016-10-03 10:01:45,370 pid=4262 [jointestimate.py] ERROR sample ELG_07-F_HAL_129 did not finish 2016-10-03 10:01:45,370 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ELG_07-F_HAL_129.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ELG_07-F_HAL_129.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ELG_07-F_HAL_129.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ELG_07-F_HAL_129.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ELG_07-F_HAL_129.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ELG_07-F_HAL_129.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ELG_07-F_HAL_129.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ELG_07-F_HAL_129.clustS.gz') 2016-10-03 10:01:45,371 pid=4262 [jointestimate.py] ERROR sample SAN_15-G3_HAL_282 did not finish 2016-10-03 10:01:45,371 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SAN_15-G3_HAL_282.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SAN_15-G3_HAL_282.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SAN_15-G3_HAL_282.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SAN_15-G3_HAL_282.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SAN_15-G3_HAL_282.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SAN_15-G3_HAL_282.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SAN_15-G3_HAL_282.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SAN_15-G3_HAL_282.clustS.gz') 2016-10-03 10:01:45,372 pid=4262 [jointestimate.py] ERROR sample CHA_01-G1_HAL_058 did not finish 2016-10-03 10:01:45,372 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_01-G1_HAL_058.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_01-G1_HAL_058.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_01-G1_HAL_058.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_01-G1_HAL_058.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_01-G1_HAL_058.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_01-G1_HAL_058.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_01-G1_HAL_058.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CHA_01-G1_HAL_058.clustS.gz') 2016-10-03 10:01:45,372 pid=4262 [jointestimate.py] ERROR sample MCR_19-G1_HAL_212 did not finish 2016-10-03 10:01:45,372 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/MCR_19-G1_HAL_212.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/MCR_19-G1_HAL_212.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/MCR_19-G1_HAL_212.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/MCR_19-G1_HAL_212.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/MCR_19-G1_HAL_212.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/MCR_19-G1_HAL_212.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/MCR_19-G1_HAL_212.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/MCR_19-G1_HAL_212.clustS.gz') 2016-10-03 10:01:45,373 pid=4262 [jointestimate.py] ERROR sample GIL_02-F_HAL_148 did not finish 2016-10-03 10:01:45,373 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_02-F_HAL_148.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_02-F_HAL_148.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_02-F_HAL_148.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_02-F_HAL_148.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_02-F_HAL_148.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_02-F_HAL_148.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_02-F_HAL_148.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_02-F_HAL_148.clustS.gz') 2016-10-03 10:01:45,373 pid=4262 [jointestimate.py] ERROR sample GEO_01A-G2_HAL_146 did not finish 2016-10-03 10:01:45,373 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GEO_01A-G2_HAL_146.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GEO_01A-G2_HAL_146.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GEO_01A-G2_HAL_146.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GEO_01A-G2_HAL_146.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GEO_01A-G2_HAL_146.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GEO_01A-G2_HAL_146.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GEO_01A-G2_HAL_146.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GEO_01A-G2_HAL_146.clustS.gz') 2016-10-03 10:01:45,374 pid=4262 [jointestimate.py] ERROR sample ART_03-F_HAL_018 did not finish 2016-10-03 10:01:45,374 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ART_03-F_HAL_018.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ART_03-F_HAL_018.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ART_03-F_HAL_018.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ART_03-F_HAL_018.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ART_03-F_HAL_018.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ART_03-F_HAL_018.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ART_03-F_HAL_018.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ART_03-F_HAL_018.clustS.gz') 2016-10-03 10:01:45,374 pid=4262 [jointestimate.py] ERROR sample BEE_02-F_HAL_449 did not finish 2016-10-03 10:01:45,374 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BEE_02-F_HAL_449.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BEE_02-F_HAL_449.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BEE_02-F_HAL_449.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BEE_02-F_HAL_449.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BEE_02-F_HAL_449.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BEE_02-F_HAL_449.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BEE_02-F_HAL_449.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BEE_02-F_HAL_449.clustS.gz') 2016-10-03 10:01:45,876 pid=4262 [jointestimate.py] ERROR sample LMA_10-G2_HAL_200 did not finish 2016-10-03 10:01:45,876 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/LMA_10-G2_HAL_200.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/LMA_10-G2_HAL_200.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/LMA_10-G2_HAL_200.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/LMA_10-G2_HAL_200.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/LMA_10-G2_HAL_200.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/LMA_10-G2_HAL_200.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/LMA_10-G2_HAL_200.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/LMA_10-G2_HAL_200.clustS.gz') 2016-10-03 10:01:45,877 pid=4262 [jointestimate.py] ERROR sample CCG_02_2-G1_HAL_045 did not finish 2016-10-03 10:01:45,877 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CCG_02_2-G1_HAL_045.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CCG_02_2-G1_HAL_045.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CCG_02_2-G1_HAL_045.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CCG_02_2-G1_HAL_045.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CCG_02_2-G1_HAL_045.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CCG_02_2-G1_HAL_045.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CCG_02_2-G1_HAL_045.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/CCG_02_2-G1_HAL_045.clustS.gz') 2016-10-03 10:01:45,878 pid=4262 [jointestimate.py] ERROR sample LME_02-G1_HAL_202 did not finish 2016-10-03 10:01:45,878 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LME_02-G1_HAL_202.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LME_02-G1_HAL_202.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LME_02-G1_HAL_202.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LME_02-G1_HAL_202.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LME_02-G1_HAL_202.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LME_02-G1_HAL_202.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LME_02-G1_HAL_202.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LME_02-G1_HAL_202.clustS.gz') 2016-10-03 10:01:45,879 pid=4262 [jointestimate.py] ERROR sample GNH_06-G1_HAL_380 did not finish 2016-10-03 10:01:45,880 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNH_06-G1_HAL_380.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNH_06-G1_HAL_380.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNH_06-G1_HAL_380.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNH_06-G1_HAL_380.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNH_06-G1_HAL_380.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNH_06-G1_HAL_380.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNH_06-G1_HAL_380.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GNH_06-G1_HAL_380.clustS.gz') 2016-10-03 10:01:46,382 pid=4262 [jointestimate.py] ERROR sample ABI_02-G1_HAL_002 did not finish 2016-10-03 10:01:46,382 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ABI_02-G1_HAL_002.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ABI_02-G1_HAL_002.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ABI_02-G1_HAL_002.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ABI_02-G1_HAL_002.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ABI_02-G1_HAL_002.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ABI_02-G1_HAL_002.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ABI_02-G1_HAL_002.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ABI_02-G1_HAL_002.clustS.gz') 2016-10-03 10:01:46,394 pid=4262 [jointestimate.py] ERROR sample KNT_03-G1_HAL_190 did not finish 2016-10-03 10:01:46,394 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/KNT_03-G1_HAL_190.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/KNT_03-G1_HAL_190.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/KNT_03-G1_HAL_190.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/KNT_03-G1_HAL_190.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/KNT_03-G1_HAL_190.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/KNT_03-G1_HAL_190.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/KNT_03-G1_HAL_190.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/KNT_03-G1_HAL_190.clustS.gz') 2016-10-03 10:01:46,394 pid=4262 [jointestimate.py] ERROR sample CAM_01-F_FIL_442 did not finish 2016-10-03 10:01:46,394 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CAM_01-F_FIL_442.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CAM_01-F_FIL_442.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CAM_01-F_FIL_442.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CAM_01-F_FIL_442.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CAM_01-F_FIL_442.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CAM_01-F_FIL_442.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CAM_01-F_FIL_442.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CAM_01-F_FIL_442.clustS.gz') 2016-10-03 10:01:46,395 pid=4262 [jointestimate.py] ERROR sample GIL_01-F_HAL_147 did not finish 2016-10-03 10:01:46,395 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/GIL_01-F_HAL_147.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/GIL_01-F_HAL_147.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/GIL_01-F_HAL_147.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/GIL_01-F_HAL_147.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/GIL_01-F_HAL_147.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/GIL_01-F_HAL_147.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/GIL_01-F_HAL_147.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/GIL_01-F_HAL_147.clustS.gz') 2016-10-03 10:01:46,395 pid=4262 [jointestimate.py] ERROR sample CKR_09-G1_HAL_072 did not finish 2016-10-03 10:01:46,395 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CKR_09-G1_HAL_072.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CKR_09-G1_HAL_072.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CKR_09-G1_HAL_072.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CKR_09-G1_HAL_072.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CKR_09-G1_HAL_072.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CKR_09-G1_HAL_072.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CKR_09-G1_HAL_072.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CKR_09-G1_HAL_072.clustS.gz') 2016-10-03 10:01:46,395 pid=4262 [jointestimate.py] ERROR sample ENR_04-F_HAL_412 did not finish 2016-10-03 10:01:46,395 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ENR_04-F_HAL_412.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ENR_04-F_HAL_412.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ENR_04-F_HAL_412.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ENR_04-F_HAL_412.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ENR_04-F_HAL_412.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ENR_04-F_HAL_412.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ENR_04-F_HAL_412.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ENR_04-F_HAL_412.clustS.gz') 2016-10-03 10:01:46,396 pid=4262 [jointestimate.py] ERROR sample SPE_27-F_HAL_337 did not finish 2016-10-03 10:01:46,396 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_27-F_HAL_337.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_27-F_HAL_337.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_27-F_HAL_337.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_27-F_HAL_337.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_27-F_HAL_337.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_27-F_HAL_337.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_27-F_HAL_337.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_27-F_HAL_337.clustS.gz') 2016-10-03 10:01:46,397 pid=4262 [jointestimate.py] ERROR sample SPE_29-F_HAL_339 did not finish 2016-10-03 10:01:46,397 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_29-F_HAL_339.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_29-F_HAL_339.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_29-F_HAL_339.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_29-F_HAL_339.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_29-F_HAL_339.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_29-F_HAL_339.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_29-F_HAL_339.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_29-F_HAL_339.clustS.gz') 2016-10-03 10:01:46,397 pid=4262 [jointestimate.py] ERROR sample HWY_03-G1_HAL_182 did not finish 2016-10-03 10:01:46,397 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/HWY_03-G1_HAL_182.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/HWY_03-G1_HAL_182.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/HWY_03-G1_HAL_182.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/HWY_03-G1_HAL_182.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/HWY_03-G1_HAL_182.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/HWY_03-G1_HAL_182.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/HWY_03-G1_HAL_182.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/HWY_03-G1_HAL_182.clustS.gz') 2016-10-03 10:01:46,899 pid=4262 [jointestimate.py] ERROR sample PCR_05-F_HAL_229 did not finish 2016-10-03 10:01:46,899 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PCR_05-F_HAL_229.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PCR_05-F_HAL_229.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PCR_05-F_HAL_229.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PCR_05-F_HAL_229.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PCR_05-F_HAL_229.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PCR_05-F_HAL_229.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PCR_05-F_HAL_229.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PCR_05-F_HAL_229.clustS.gz') 2016-10-03 10:01:46,901 pid=4262 [jointestimate.py] ERROR sample AWR_02_1-G1_FIL_028 did not finish 2016-10-03 10:01:46,901 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/AWR_02_1-G1_FIL_028.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/AWR_02_1-G1_FIL_028.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/AWR_02_1-G1_FIL_028.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/AWR_02_1-G1_FIL_028.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/AWR_02_1-G1_FIL_028.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/AWR_02_1-G1_FIL_028.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/AWR_02_1-G1_FIL_028.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/AWR_02_1-G1_FIL_028.clustS.gz') 2016-10-03 10:01:46,902 pid=4262 [jointestimate.py] ERROR sample PCR_14-F_HAL_235 did not finish 2016-10-03 10:01:46,903 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_14-F_HAL_235.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_14-F_HAL_235.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_14-F_HAL_235.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_14-F_HAL_235.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_14-F_HAL_235.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_14-F_HAL_235.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_14-F_HAL_235.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_14-F_HAL_235.clustS.gz') 2016-10-03 10:01:47,405 pid=4262 [jointestimate.py] ERROR sample ALI_07-G1_HAL_010 did not finish 2016-10-03 10:01:47,405 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ALI_07-G1_HAL_010.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ALI_07-G1_HAL_010.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ALI_07-G1_HAL_010.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ALI_07-G1_HAL_010.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ALI_07-G1_HAL_010.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ALI_07-G1_HAL_010.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ALI_07-G1_HAL_010.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ALI_07-G1_HAL_010.clustS.gz') 2016-10-03 10:01:47,405 pid=4262 [jointestimate.py] ERROR sample DOF_08-G1_HAL_116 did not finish 2016-10-03 10:01:47,405 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/DOF_08-G1_HAL_116.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/DOF_08-G1_HAL_116.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/DOF_08-G1_HAL_116.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/DOF_08-G1_HAL_116.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/DOF_08-G1_HAL_116.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/DOF_08-G1_HAL_116.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/DOF_08-G1_HAL_116.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/DOF_08-G1_HAL_116.clustS.gz') 2016-10-03 10:01:47,406 pid=4262 [jointestimate.py] ERROR sample JHC_01-G1_HAL_185 did not finish 2016-10-03 10:01:47,407 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/JHC_01-G1_HAL_185.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/JHC_01-G1_HAL_185.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/JHC_01-G1_HAL_185.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/JHC_01-G1_HAL_185.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/JHC_01-G1_HAL_185.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/JHC_01-G1_HAL_185.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/JHC_01-G1_HAL_185.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/JHC_01-G1_HAL_185.clustS.gz') 2016-10-03 10:01:47,407 pid=4262 [jointestimate.py] ERROR sample FIL_07-F_FIL_440 did not finish 2016-10-03 10:01:47,407 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/FIL_07-F_FIL_440.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/FIL_07-F_FIL_440.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/FIL_07-F_FIL_440.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/FIL_07-F_FIL_440.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/FIL_07-F_FIL_440.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/FIL_07-F_FIL_440.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/FIL_07-F_FIL_440.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/FIL_07-F_FIL_440.clustS.gz') 2016-10-03 10:01:47,409 pid=4262 [jointestimate.py] ERROR sample ARB_01-G1_HAL_011 did not finish 2016-10-03 10:01:47,409 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ARB_01-G1_HAL_011.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ARB_01-G1_HAL_011.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ARB_01-G1_HAL_011.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ARB_01-G1_HAL_011.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ARB_01-G1_HAL_011.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ARB_01-G1_HAL_011.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ARB_01-G1_HAL_011.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/ARB_01-G1_HAL_011.clustS.gz') 2016-10-03 10:01:47,409 pid=4262 [jointestimate.py] ERROR sample SVN_NN_HAL_383 did not finish 2016-10-03 10:01:47,409 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SVN_NN_HAL_383.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SVN_NN_HAL_383.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SVN_NN_HAL_383.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SVN_NN_HAL_383.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SVN_NN_HAL_383.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SVN_NN_HAL_383.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SVN_NN_HAL_383.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SVN_NN_HAL_383.clustS.gz') 2016-10-03 10:01:47,410 pid=4262 [jointestimate.py] ERROR sample ART_04-F_HAL_019 did not finish 2016-10-03 10:01:47,410 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ART_04-F_HAL_019.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ART_04-F_HAL_019.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ART_04-F_HAL_019.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ART_04-F_HAL_019.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ART_04-F_HAL_019.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ART_04-F_HAL_019.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ART_04-F_HAL_019.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ART_04-F_HAL_019.clustS.gz') 2016-10-03 10:01:47,912 pid=4262 [jointestimate.py] ERROR sample SPE_09-G1_HAL_331 did not finish 2016-10-03 10:01:47,912 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_09-G1_HAL_331.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_09-G1_HAL_331.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_09-G1_HAL_331.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_09-G1_HAL_331.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_09-G1_HAL_331.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_09-G1_HAL_331.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_09-G1_HAL_331.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_09-G1_HAL_331.clustS.gz') 2016-10-03 10:01:47,913 pid=4262 [jointestimate.py] ERROR sample CCL_01-F_HAL_050 did not finish 2016-10-03 10:01:47,913 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CCL_01-F_HAL_050.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CCL_01-F_HAL_050.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CCL_01-F_HAL_050.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CCL_01-F_HAL_050.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CCL_01-F_HAL_050.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CCL_01-F_HAL_050.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CCL_01-F_HAL_050.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CCL_01-F_HAL_050.clustS.gz') 2016-10-03 10:01:47,914 pid=4262 [jointestimate.py] ERROR sample KIC_06-G2_HAL_189 did not finish 2016-10-03 10:01:47,914 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KIC_06-G2_HAL_189.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KIC_06-G2_HAL_189.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KIC_06-G2_HAL_189.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KIC_06-G2_HAL_189.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KIC_06-G2_HAL_189.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KIC_06-G2_HAL_189.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KIC_06-G2_HAL_189.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/KIC_06-G2_HAL_189.clustS.gz') 2016-10-03 10:01:47,914 pid=4262 [jointestimate.py] ERROR sample STW_13-G1_HAL_362 did not finish 2016-10-03 10:01:47,914 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/STW_13-G1_HAL_362.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/STW_13-G1_HAL_362.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/STW_13-G1_HAL_362.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/STW_13-G1_HAL_362.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/STW_13-G1_HAL_362.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/STW_13-G1_HAL_362.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/STW_13-G1_HAL_362.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/STW_13-G1_HAL_362.clustS.gz') 2016-10-03 10:01:47,923 pid=4262 [jointestimate.py] ERROR sample CHA_05-G1_HAL_062 did not finish 2016-10-03 10:01:47,923 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CHA_05-G1_HAL_062.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CHA_05-G1_HAL_062.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CHA_05-G1_HAL_062.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CHA_05-G1_HAL_062.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CHA_05-G1_HAL_062.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CHA_05-G1_HAL_062.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CHA_05-G1_HAL_062.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/CHA_05-G1_HAL_062.clustS.gz') 2016-10-03 10:01:47,924 pid=4262 [jointestimate.py] ERROR sample ZAP_02-F_FIL_452 did not finish 2016-10-03 10:01:47,924 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ZAP_02-F_FIL_452.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ZAP_02-F_FIL_452.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ZAP_02-F_FIL_452.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ZAP_02-F_FIL_452.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ZAP_02-F_FIL_452.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ZAP_02-F_FIL_452.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ZAP_02-F_FIL_452.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ZAP_02-F_FIL_452.clustS.gz') 2016-10-03 10:01:47,926 pid=4262 [jointestimate.py] ERROR sample PCR_01-F_HAL_225 did not finish 2016-10-03 10:01:47,927 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PCR_01-F_HAL_225.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PCR_01-F_HAL_225.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PCR_01-F_HAL_225.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PCR_01-F_HAL_225.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PCR_01-F_HAL_225.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PCR_01-F_HAL_225.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PCR_01-F_HAL_225.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/PCR_01-F_HAL_225.clustS.gz') 2016-10-03 10:01:48,428 pid=4262 [jointestimate.py] ERROR sample SEV_22-F_HAL_303 did not finish 2016-10-03 10:01:48,428 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEV_22-F_HAL_303.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEV_22-F_HAL_303.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEV_22-F_HAL_303.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEV_22-F_HAL_303.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEV_22-F_HAL_303.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEV_22-F_HAL_303.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEV_22-F_HAL_303.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SEV_22-F_HAL_303.clustS.gz') 2016-10-03 10:01:48,430 pid=4262 [jointestimate.py] ERROR sample CCL_02-F_HAL_051 did not finish 2016-10-03 10:01:48,430 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CCL_02-F_HAL_051.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CCL_02-F_HAL_051.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CCL_02-F_HAL_051.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CCL_02-F_HAL_051.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CCL_02-F_HAL_051.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CCL_02-F_HAL_051.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CCL_02-F_HAL_051.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CCL_02-F_HAL_051.clustS.gz') 2016-10-03 10:01:48,431 pid=4262 [jointestimate.py] ERROR sample ARB_03-F_HAL_012 did not finish 2016-10-03 10:01:48,431 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ARB_03-F_HAL_012.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ARB_03-F_HAL_012.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ARB_03-F_HAL_012.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ARB_03-F_HAL_012.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ARB_03-F_HAL_012.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ARB_03-F_HAL_012.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ARB_03-F_HAL_012.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ARB_03-F_HAL_012.clustS.gz') 2016-10-03 10:01:48,933 pid=4262 [jointestimate.py] ERROR sample SPE_38-F_HAL_348 did not finish 2016-10-03 10:01:48,933 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_38-F_HAL_348.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_38-F_HAL_348.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_38-F_HAL_348.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_38-F_HAL_348.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_38-F_HAL_348.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_38-F_HAL_348.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_38-F_HAL_348.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_38-F_HAL_348.clustS.gz') 2016-10-03 10:01:48,933 pid=4262 [jointestimate.py] ERROR sample GNZ_31-F_HAL_493 did not finish 2016-10-03 10:01:48,934 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_31-F_HAL_493.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_31-F_HAL_493.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_31-F_HAL_493.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_31-F_HAL_493.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_31-F_HAL_493.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_31-F_HAL_493.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_31-F_HAL_493.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_31-F_HAL_493.clustS.gz') 2016-10-03 10:01:48,935 pid=4262 [jointestimate.py] ERROR sample DOF_02-G1_HAL_387 did not finish 2016-10-03 10:01:48,935 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/DOF_02-G1_HAL_387.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/DOF_02-G1_HAL_387.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/DOF_02-G1_HAL_387.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/DOF_02-G1_HAL_387.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/DOF_02-G1_HAL_387.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/DOF_02-G1_HAL_387.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/DOF_02-G1_HAL_387.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/DOF_02-G1_HAL_387.clustS.gz') 2016-10-03 10:01:48,935 pid=4262 [jointestimate.py] ERROR sample SPE_05-G1_HAL_329 did not finish 2016-10-03 10:01:48,935 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_05-G1_HAL_329.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_05-G1_HAL_329.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_05-G1_HAL_329.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_05-G1_HAL_329.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_05-G1_HAL_329.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_05-G1_HAL_329.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_05-G1_HAL_329.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_05-G1_HAL_329.clustS.gz') 2016-10-03 10:01:48,935 pid=4262 [jointestimate.py] ERROR sample CHA_04-G1_HAL_061 did not finish 2016-10-03 10:01:48,936 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CHA_04-G1_HAL_061.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CHA_04-G1_HAL_061.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CHA_04-G1_HAL_061.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CHA_04-G1_HAL_061.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CHA_04-G1_HAL_061.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CHA_04-G1_HAL_061.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CHA_04-G1_HAL_061.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CHA_04-G1_HAL_061.clustS.gz') 2016-10-03 10:01:48,937 pid=4262 [jointestimate.py] ERROR sample GNZ_26-F_HAL_488 did not finish 2016-10-03 10:01:48,937 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_26-F_HAL_488.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_26-F_HAL_488.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_26-F_HAL_488.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_26-F_HAL_488.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_26-F_HAL_488.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_26-F_HAL_488.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_26-F_HAL_488.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_26-F_HAL_488.clustS.gz') 2016-10-03 10:01:48,938 pid=4262 [jointestimate.py] ERROR sample PDF_07-G1_HAL_256 did not finish 2016-10-03 10:01:48,938 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDF_07-G1_HAL_256.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDF_07-G1_HAL_256.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDF_07-G1_HAL_256.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDF_07-G1_HAL_256.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDF_07-G1_HAL_256.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDF_07-G1_HAL_256.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDF_07-G1_HAL_256.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDF_07-G1_HAL_256.clustS.gz') 2016-10-03 10:01:49,440 pid=4262 [jointestimate.py] ERROR sample PDT_04-F_HAL_428 did not finish 2016-10-03 10:01:49,441 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_04-F_HAL_428.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_04-F_HAL_428.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_04-F_HAL_428.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_04-F_HAL_428.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_04-F_HAL_428.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_04-F_HAL_428.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_04-F_HAL_428.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_04-F_HAL_428.clustS.gz') 2016-10-03 10:01:49,945 pid=4262 [jointestimate.py] ERROR sample BUS_04-G1_HAL_039 did not finish 2016-10-03 10:01:49,946 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/BUS_04-G1_HAL_039.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/BUS_04-G1_HAL_039.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/BUS_04-G1_HAL_039.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/BUS_04-G1_HAL_039.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/BUS_04-G1_HAL_039.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/BUS_04-G1_HAL_039.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/BUS_04-G1_HAL_039.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/BUS_04-G1_HAL_039.clustS.gz') 2016-10-03 10:01:49,947 pid=4262 [jointestimate.py] ERROR sample MCM_01-F_FIL_459 did not finish 2016-10-03 10:01:49,948 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MCM_01-F_FIL_459.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MCM_01-F_FIL_459.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MCM_01-F_FIL_459.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MCM_01-F_FIL_459.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MCM_01-F_FIL_459.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MCM_01-F_FIL_459.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MCM_01-F_FIL_459.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/MCM_01-F_FIL_459.clustS.gz') 2016-10-03 10:01:49,948 pid=4262 [jointestimate.py] ERROR sample HAL_02-G2_HAL_175 did not finish 2016-10-03 10:01:49,948 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HAL_02-G2_HAL_175.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HAL_02-G2_HAL_175.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HAL_02-G2_HAL_175.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HAL_02-G2_HAL_175.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HAL_02-G2_HAL_175.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HAL_02-G2_HAL_175.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HAL_02-G2_HAL_175.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/HAL_02-G2_HAL_175.clustS.gz') 2016-10-03 10:01:49,949 pid=4262 [jointestimate.py] ERROR sample GIL_05-G1_HAL_151 did not finish 2016-10-03 10:01:49,949 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/GIL_05-G1_HAL_151.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/GIL_05-G1_HAL_151.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/GIL_05-G1_HAL_151.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/GIL_05-G1_HAL_151.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/GIL_05-G1_HAL_151.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/GIL_05-G1_HAL_151.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/GIL_05-G1_HAL_151.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/GIL_05-G1_HAL_151.clustS.gz') 2016-10-03 10:01:49,949 pid=4262 [jointestimate.py] ERROR sample SPE_39-F_HAL_389 did not finish 2016-10-03 10:01:49,949 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_39-F_HAL_389.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_39-F_HAL_389.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_39-F_HAL_389.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_39-F_HAL_389.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_39-F_HAL_389.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_39-F_HAL_389.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_39-F_HAL_389.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/SPE_39-F_HAL_389.clustS.gz') 2016-10-03 10:01:49,950 pid=4262 [jointestimate.py] ERROR sample SPE_26-F_HAL_336 did not finish 2016-10-03 10:01:49,950 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SPE_26-F_HAL_336.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SPE_26-F_HAL_336.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SPE_26-F_HAL_336.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SPE_26-F_HAL_336.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SPE_26-F_HAL_336.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SPE_26-F_HAL_336.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SPE_26-F_HAL_336.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SPE_26-F_HAL_336.clustS.gz') 2016-10-03 10:01:50,452 pid=4262 [jointestimate.py] ERROR sample SRG_05-F_HAL_399 did not finish 2016-10-03 10:01:50,453 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SRG_05-F_HAL_399.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SRG_05-F_HAL_399.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SRG_05-F_HAL_399.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SRG_05-F_HAL_399.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SRG_05-F_HAL_399.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SRG_05-F_HAL_399.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SRG_05-F_HAL_399.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SRG_05-F_HAL_399.clustS.gz') 2016-10-03 10:01:50,454 pid=4262 [jointestimate.py] ERROR sample GIL_06-G1_HAL_152 did not finish 2016-10-03 10:01:50,454 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GIL_06-G1_HAL_152.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GIL_06-G1_HAL_152.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GIL_06-G1_HAL_152.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GIL_06-G1_HAL_152.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GIL_06-G1_HAL_152.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GIL_06-G1_HAL_152.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GIL_06-G1_HAL_152.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GIL_06-G1_HAL_152.clustS.gz') 2016-10-03 10:01:50,956 pid=4262 [jointestimate.py] ERROR sample CCG_04-G1_HAL_047 did not finish 2016-10-03 10:01:50,956 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CCG_04-G1_HAL_047.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CCG_04-G1_HAL_047.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CCG_04-G1_HAL_047.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CCG_04-G1_HAL_047.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CCG_04-G1_HAL_047.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CCG_04-G1_HAL_047.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CCG_04-G1_HAL_047.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CCG_04-G1_HAL_047.clustS.gz') 2016-10-03 10:01:50,957 pid=4262 [jointestimate.py] ERROR sample PCR_55-G1_HAL_238 did not finish 2016-10-03 10:01:50,957 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/PCR_55-G1_HAL_238.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/PCR_55-G1_HAL_238.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/PCR_55-G1_HAL_238.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/PCR_55-G1_HAL_238.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/PCR_55-G1_HAL_238.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/PCR_55-G1_HAL_238.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/PCR_55-G1_HAL_238.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/PCR_55-G1_HAL_238.clustS.gz') 2016-10-03 10:01:50,959 pid=4262 [jointestimate.py] ERROR sample LMA_02-G1_HAL_197 did not finish 2016-10-03 10:01:50,959 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/LMA_02-G1_HAL_197.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/LMA_02-G1_HAL_197.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/LMA_02-G1_HAL_197.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/LMA_02-G1_HAL_197.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/LMA_02-G1_HAL_197.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/LMA_02-G1_HAL_197.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/LMA_02-G1_HAL_197.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/LMA_02-G1_HAL_197.clustS.gz') 2016-10-03 10:01:50,959 pid=4262 [jointestimate.py] ERROR sample UVL_02-F_HAL_438 did not finish 2016-10-03 10:01:50,959 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/UVL_02-F_HAL_438.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/UVL_02-F_HAL_438.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/UVL_02-F_HAL_438.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/UVL_02-F_HAL_438.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/UVL_02-F_HAL_438.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/UVL_02-F_HAL_438.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/UVL_02-F_HAL_438.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/UVL_02-F_HAL_438.clustS.gz') 2016-10-03 10:01:50,960 pid=4262 [jointestimate.py] ERROR sample CKR_04-G1_HAL_069 did not finish 2016-10-03 10:01:50,960 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CKR_04-G1_HAL_069.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CKR_04-G1_HAL_069.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CKR_04-G1_HAL_069.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CKR_04-G1_HAL_069.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CKR_04-G1_HAL_069.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CKR_04-G1_HAL_069.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CKR_04-G1_HAL_069.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CKR_04-G1_HAL_069.clustS.gz') 2016-10-03 10:01:50,960 pid=4262 [jointestimate.py] ERROR sample POI_06-G1_HAL_270 did not finish 2016-10-03 10:01:50,961 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/POI_06-G1_HAL_270.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/POI_06-G1_HAL_270.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/POI_06-G1_HAL_270.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/POI_06-G1_HAL_270.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/POI_06-G1_HAL_270.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/POI_06-G1_HAL_270.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/POI_06-G1_HAL_270.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/POI_06-G1_HAL_270.clustS.gz') 2016-10-03 10:01:51,463 pid=4262 [jointestimate.py] ERROR sample GIL_04-F_HAL_150 did not finish 2016-10-03 10:01:51,463 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_04-F_HAL_150.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_04-F_HAL_150.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_04-F_HAL_150.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_04-F_HAL_150.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_04-F_HAL_150.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_04-F_HAL_150.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_04-F_HAL_150.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/GIL_04-F_HAL_150.clustS.gz') 2016-10-03 10:01:51,966 pid=4262 [jointestimate.py] ERROR sample PDB_01-G1_HAL_241 did not finish 2016-10-03 10:01:51,966 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDB_01-G1_HAL_241.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDB_01-G1_HAL_241.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDB_01-G1_HAL_241.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDB_01-G1_HAL_241.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDB_01-G1_HAL_241.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDB_01-G1_HAL_241.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDB_01-G1_HAL_241.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDB_01-G1_HAL_241.clustS.gz') 2016-10-03 10:01:51,968 pid=4262 [jointestimate.py] ERROR sample PIN_01B-G2_HAL_266 did not finish 2016-10-03 10:01:51,968 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PIN_01B-G2_HAL_266.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PIN_01B-G2_HAL_266.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PIN_01B-G2_HAL_266.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PIN_01B-G2_HAL_266.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PIN_01B-G2_HAL_266.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PIN_01B-G2_HAL_266.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PIN_01B-G2_HAL_266.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PIN_01B-G2_HAL_266.clustS.gz') 2016-10-03 10:01:51,969 pid=4262 [jointestimate.py] ERROR sample HAM_02-G1_HAL_178 did not finish 2016-10-03 10:01:51,970 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/HAM_02-G1_HAL_178.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/HAM_02-G1_HAL_178.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/HAM_02-G1_HAL_178.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/HAM_02-G1_HAL_178.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/HAM_02-G1_HAL_178.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/HAM_02-G1_HAL_178.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/HAM_02-G1_HAL_178.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/HAM_02-G1_HAL_178.clustS.gz') 2016-10-03 10:01:51,970 pid=4262 [jointestimate.py] ERROR sample HWY_01-G2_HAL_180 did not finish 2016-10-03 10:01:51,971 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/HWY_01-G2_HAL_180.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/HWY_01-G2_HAL_180.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/HWY_01-G2_HAL_180.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/HWY_01-G2_HAL_180.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/HWY_01-G2_HAL_180.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/HWY_01-G2_HAL_180.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/HWY_01-G2_HAL_180.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/HWY_01-G2_HAL_180.clustS.gz') 2016-10-03 10:01:51,971 pid=4262 [jointestimate.py] ERROR sample MVF_02-F_HAL_455 did not finish 2016-10-03 10:01:51,971 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/MVF_02-F_HAL_455.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/MVF_02-F_HAL_455.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/MVF_02-F_HAL_455.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/MVF_02-F_HAL_455.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/MVF_02-F_HAL_455.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/MVF_02-F_HAL_455.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/MVF_02-F_HAL_455.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/MVF_02-F_HAL_455.clustS.gz') 2016-10-03 10:01:52,473 pid=4262 [jointestimate.py] ERROR sample FIL_05-G2_FIL_145 did not finish 2016-10-03 10:01:52,473 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/FIL_05-G2_FIL_145.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/FIL_05-G2_FIL_145.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/FIL_05-G2_FIL_145.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/FIL_05-G2_FIL_145.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/FIL_05-G2_FIL_145.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/FIL_05-G2_FIL_145.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/FIL_05-G2_FIL_145.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/FIL_05-G2_FIL_145.clustS.gz') 2016-10-03 10:01:52,474 pid=4262 [jointestimate.py] ERROR sample SPJ_04-G1_HAL_352 did not finish 2016-10-03 10:01:52,474 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_04-G1_HAL_352.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_04-G1_HAL_352.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_04-G1_HAL_352.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_04-G1_HAL_352.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_04-G1_HAL_352.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_04-G1_HAL_352.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_04-G1_HAL_352.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SPJ_04-G1_HAL_352.clustS.gz') 2016-10-03 10:01:52,476 pid=4262 [jointestimate.py] ERROR sample PDT_08-F_HAL_432 did not finish 2016-10-03 10:01:52,476 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_08-F_HAL_432.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_08-F_HAL_432.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_08-F_HAL_432.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_08-F_HAL_432.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_08-F_HAL_432.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_08-F_HAL_432.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_08-F_HAL_432.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDT_08-F_HAL_432.clustS.gz') 2016-10-03 10:01:52,978 pid=4262 [jointestimate.py] ERROR sample SPE_01-G1_HAL_327 did not finish 2016-10-03 10:01:52,978 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SPE_01-G1_HAL_327.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SPE_01-G1_HAL_327.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SPE_01-G1_HAL_327.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SPE_01-G1_HAL_327.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SPE_01-G1_HAL_327.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SPE_01-G1_HAL_327.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SPE_01-G1_HAL_327.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SPE_01-G1_HAL_327.clustS.gz') 2016-10-03 10:01:52,979 pid=4262 [jointestimate.py] ERROR sample CNF_03-G1_HAL_086 did not finish 2016-10-03 10:01:52,979 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CNF_03-G1_HAL_086.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CNF_03-G1_HAL_086.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CNF_03-G1_HAL_086.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CNF_03-G1_HAL_086.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CNF_03-G1_HAL_086.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CNF_03-G1_HAL_086.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CNF_03-G1_HAL_086.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CNF_03-G1_HAL_086.clustS.gz') 2016-10-03 10:01:52,979 pid=4262 [jointestimate.py] ERROR sample HAM_01-G2_HAL_177 did not finish 2016-10-03 10:01:52,979 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/HAM_01-G2_HAL_177.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/HAM_01-G2_HAL_177.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/HAM_01-G2_HAL_177.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/HAM_01-G2_HAL_177.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/HAM_01-G2_HAL_177.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/HAM_01-G2_HAL_177.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/HAM_01-G2_HAL_177.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/HAM_01-G2_HAL_177.clustS.gz') 2016-10-03 10:01:52,992 pid=4262 [jointestimate.py] ERROR sample RAN_05-G1_HAL_280 did not finish 2016-10-03 10:01:52,992 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAN_05-G1_HAL_280.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAN_05-G1_HAL_280.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAN_05-G1_HAL_280.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAN_05-G1_HAL_280.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAN_05-G1_HAL_280.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAN_05-G1_HAL_280.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAN_05-G1_HAL_280.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAN_05-G1_HAL_280.clustS.gz') 2016-10-03 10:01:53,493 pid=4262 [jointestimate.py] ERROR sample GNZ_27-F_HAL_489 did not finish 2016-10-03 10:01:53,493 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GNZ_27-F_HAL_489.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GNZ_27-F_HAL_489.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GNZ_27-F_HAL_489.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GNZ_27-F_HAL_489.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GNZ_27-F_HAL_489.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GNZ_27-F_HAL_489.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GNZ_27-F_HAL_489.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GNZ_27-F_HAL_489.clustS.gz') 2016-10-03 10:01:53,495 pid=4262 [jointestimate.py] ERROR sample COR_07-G1_HAL_095 did not finish 2016-10-03 10:01:53,495 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/COR_07-G1_HAL_095.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/COR_07-G1_HAL_095.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/COR_07-G1_HAL_095.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/COR_07-G1_HAL_095.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/COR_07-G1_HAL_095.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/COR_07-G1_HAL_095.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/COR_07-G1_HAL_095.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/COR_07-G1_HAL_095.clustS.gz') 2016-10-03 10:01:53,496 pid=4262 [jointestimate.py] ERROR sample SEV_19-F_HAL_381 did not finish 2016-10-03 10:01:53,496 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_19-F_HAL_381.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_19-F_HAL_381.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_19-F_HAL_381.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_19-F_HAL_381.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_19-F_HAL_381.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_19-F_HAL_381.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_19-F_HAL_381.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/SEV_19-F_HAL_381.clustS.gz') 2016-10-03 10:01:53,999 pid=4262 [jointestimate.py] ERROR sample GIL_10-G1_HAL_156 did not finish 2016-10-03 10:01:53,999 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GIL_10-G1_HAL_156.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GIL_10-G1_HAL_156.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GIL_10-G1_HAL_156.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GIL_10-G1_HAL_156.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GIL_10-G1_HAL_156.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GIL_10-G1_HAL_156.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GIL_10-G1_HAL_156.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GIL_10-G1_HAL_156.clustS.gz') 2016-10-03 10:01:54,001 pid=4262 [jointestimate.py] ERROR sample SLS_02-G1_HAL_311 did not finish 2016-10-03 10:01:54,001 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SLS_02-G1_HAL_311.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SLS_02-G1_HAL_311.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SLS_02-G1_HAL_311.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SLS_02-G1_HAL_311.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SLS_02-G1_HAL_311.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SLS_02-G1_HAL_311.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SLS_02-G1_HAL_311.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SLS_02-G1_HAL_311.clustS.gz') 2016-10-03 10:01:54,001 pid=4262 [jointestimate.py] ERROR sample BUS_01-G1_HAL_036 did not finish 2016-10-03 10:01:54,002 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/BUS_01-G1_HAL_036.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/BUS_01-G1_HAL_036.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/BUS_01-G1_HAL_036.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/BUS_01-G1_HAL_036.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/BUS_01-G1_HAL_036.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/BUS_01-G1_HAL_036.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/BUS_01-G1_HAL_036.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/BUS_01-G1_HAL_036.clustS.gz') 2016-10-03 10:01:54,503 pid=4262 [jointestimate.py] ERROR sample WBW_09-G1_HAL_377 did not finish 2016-10-03 10:01:54,504 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/WBW_09-G1_HAL_377.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/WBW_09-G1_HAL_377.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/WBW_09-G1_HAL_377.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/WBW_09-G1_HAL_377.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/WBW_09-G1_HAL_377.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/WBW_09-G1_HAL_377.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/WBW_09-G1_HAL_377.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/WBW_09-G1_HAL_377.clustS.gz') 2016-10-03 10:01:54,505 pid=4262 [jointestimate.py] ERROR sample BUS_03-G2_HAL_038 did not finish 2016-10-03 10:01:54,505 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BUS_03-G2_HAL_038.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BUS_03-G2_HAL_038.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BUS_03-G2_HAL_038.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BUS_03-G2_HAL_038.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BUS_03-G2_HAL_038.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BUS_03-G2_HAL_038.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BUS_03-G2_HAL_038.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BUS_03-G2_HAL_038.clustS.gz') 2016-10-03 10:01:54,505 pid=4262 [jointestimate.py] ERROR sample ABI_03-G1_HAL_003 did not finish 2016-10-03 10:01:54,505 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ABI_03-G1_HAL_003.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ABI_03-G1_HAL_003.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ABI_03-G1_HAL_003.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ABI_03-G1_HAL_003.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ABI_03-G1_HAL_003.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ABI_03-G1_HAL_003.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ABI_03-G1_HAL_003.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ABI_03-G1_HAL_003.clustS.gz') 2016-10-03 10:01:54,506 pid=4262 [jointestimate.py] ERROR sample PCR_58-G1_HAL_239 did not finish 2016-10-03 10:01:54,506 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_58-G1_HAL_239.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_58-G1_HAL_239.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_58-G1_HAL_239.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_58-G1_HAL_239.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_58-G1_HAL_239.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_58-G1_HAL_239.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_58-G1_HAL_239.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_58-G1_HAL_239.clustS.gz') 2016-10-03 10:01:55,009 pid=4262 [jointestimate.py] ERROR sample CCG_03-G1_HAL_046 did not finish 2016-10-03 10:01:55,009 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CCG_03-G1_HAL_046.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CCG_03-G1_HAL_046.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CCG_03-G1_HAL_046.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CCG_03-G1_HAL_046.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CCG_03-G1_HAL_046.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CCG_03-G1_HAL_046.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CCG_03-G1_HAL_046.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CCG_03-G1_HAL_046.clustS.gz') 2016-10-03 10:01:55,010 pid=4262 [jointestimate.py] ERROR sample SRG_09-F_HAL_402 did not finish 2016-10-03 10:01:55,010 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SRG_09-F_HAL_402.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SRG_09-F_HAL_402.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SRG_09-F_HAL_402.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SRG_09-F_HAL_402.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SRG_09-F_HAL_402.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SRG_09-F_HAL_402.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SRG_09-F_HAL_402.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SRG_09-F_HAL_402.clustS.gz') 2016-10-03 10:01:55,514 pid=4262 [jointestimate.py] ERROR sample SPE_36-F_HAL_346 did not finish 2016-10-03 10:01:55,515 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SPE_36-F_HAL_346.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SPE_36-F_HAL_346.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SPE_36-F_HAL_346.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SPE_36-F_HAL_346.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SPE_36-F_HAL_346.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SPE_36-F_HAL_346.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SPE_36-F_HAL_346.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/SPE_36-F_HAL_346.clustS.gz') 2016-10-03 10:01:55,515 pid=4262 [jointestimate.py] ERROR sample SPJ_05-F_HAL_353 did not finish 2016-10-03 10:01:55,515 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPJ_05-F_HAL_353.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPJ_05-F_HAL_353.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPJ_05-F_HAL_353.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPJ_05-F_HAL_353.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPJ_05-F_HAL_353.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPJ_05-F_HAL_353.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPJ_05-F_HAL_353.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPJ_05-F_HAL_353.clustS.gz') 2016-10-03 10:01:55,517 pid=4262 [jointestimate.py] ERROR sample ENR_02-F_HAL_410 did not finish 2016-10-03 10:01:55,517 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ENR_02-F_HAL_410.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ENR_02-F_HAL_410.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ENR_02-F_HAL_410.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ENR_02-F_HAL_410.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ENR_02-F_HAL_410.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ENR_02-F_HAL_410.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ENR_02-F_HAL_410.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/ENR_02-F_HAL_410.clustS.gz') 2016-10-03 10:01:55,518 pid=4262 [jointestimate.py] ERROR sample LME_01-G1_HAL_201 did not finish 2016-10-03 10:01:55,518 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/LME_01-G1_HAL_201.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/LME_01-G1_HAL_201.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/LME_01-G1_HAL_201.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/LME_01-G1_HAL_201.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/LME_01-G1_HAL_201.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/LME_01-G1_HAL_201.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/LME_01-G1_HAL_201.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/LME_01-G1_HAL_201.clustS.gz') 2016-10-03 10:01:55,518 pid=4262 [jointestimate.py] ERROR sample JHC_03-G1_HAL_186 did not finish 2016-10-03 10:01:55,519 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/JHC_03-G1_HAL_186.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/JHC_03-G1_HAL_186.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/JHC_03-G1_HAL_186.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/JHC_03-G1_HAL_186.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/JHC_03-G1_HAL_186.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/JHC_03-G1_HAL_186.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/JHC_03-G1_HAL_186.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/JHC_03-G1_HAL_186.clustS.gz') 2016-10-03 10:01:56,020 pid=4262 [jointestimate.py] ERROR sample ARB_04-F_HAL_013 did not finish 2016-10-03 10:01:56,020 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ARB_04-F_HAL_013.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ARB_04-F_HAL_013.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ARB_04-F_HAL_013.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ARB_04-F_HAL_013.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ARB_04-F_HAL_013.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ARB_04-F_HAL_013.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ARB_04-F_HAL_013.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/ARB_04-F_HAL_013.clustS.gz') 2016-10-03 10:01:56,024 pid=4262 [jointestimate.py] ERROR sample DOF_01-G1_HAL_115 did not finish 2016-10-03 10:01:56,024 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_01-G1_HAL_115.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_01-G1_HAL_115.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_01-G1_HAL_115.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_01-G1_HAL_115.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_01-G1_HAL_115.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_01-G1_HAL_115.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_01-G1_HAL_115.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/DOF_01-G1_HAL_115.clustS.gz') 2016-10-03 10:01:56,526 pid=4262 [jointestimate.py] ERROR sample BUS_05-G1_HAL_040 did not finish 2016-10-03 10:01:56,526 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BUS_05-G1_HAL_040.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BUS_05-G1_HAL_040.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BUS_05-G1_HAL_040.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BUS_05-G1_HAL_040.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BUS_05-G1_HAL_040.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BUS_05-G1_HAL_040.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BUS_05-G1_HAL_040.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/BUS_05-G1_HAL_040.clustS.gz') 2016-10-03 10:01:56,527 pid=4262 [jointestimate.py] ERROR sample CBS_12-F_HAL_437 did not finish 2016-10-03 10:01:56,527 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CBS_12-F_HAL_437.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CBS_12-F_HAL_437.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CBS_12-F_HAL_437.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CBS_12-F_HAL_437.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CBS_12-F_HAL_437.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CBS_12-F_HAL_437.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CBS_12-F_HAL_437.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CBS_12-F_HAL_437.clustS.gz') 2016-10-03 10:01:56,528 pid=4262 [jointestimate.py] ERROR sample CCO_03-F_HAL_057 did not finish 2016-10-03 10:01:56,528 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CCO_03-F_HAL_057.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CCO_03-F_HAL_057.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CCO_03-F_HAL_057.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CCO_03-F_HAL_057.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CCO_03-F_HAL_057.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CCO_03-F_HAL_057.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CCO_03-F_HAL_057.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/CCO_03-F_HAL_057.clustS.gz') 2016-10-03 10:01:56,529 pid=4262 [jointestimate.py] ERROR sample ZAP_03-F_FIL_453 did not finish 2016-10-03 10:01:56,529 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ZAP_03-F_FIL_453.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ZAP_03-F_FIL_453.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ZAP_03-F_FIL_453.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ZAP_03-F_FIL_453.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ZAP_03-F_FIL_453.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ZAP_03-F_FIL_453.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ZAP_03-F_FIL_453.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/ZAP_03-F_FIL_453.clustS.gz') 2016-10-03 10:01:57,033 pid=4262 [jointestimate.py] ERROR sample SPE_35-F_HAL_345 did not finish 2016-10-03 10:01:57,033 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_35-F_HAL_345.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_35-F_HAL_345.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_35-F_HAL_345.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_35-F_HAL_345.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_35-F_HAL_345.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_35-F_HAL_345.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_35-F_HAL_345.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/SPE_35-F_HAL_345.clustS.gz') 2016-10-03 10:01:57,034 pid=4262 [jointestimate.py] ERROR sample ARB_05-F_HAL_014 did not finish 2016-10-03 10:01:57,034 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/ARB_05-F_HAL_014.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/ARB_05-F_HAL_014.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/ARB_05-F_HAL_014.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/ARB_05-F_HAL_014.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/ARB_05-F_HAL_014.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/ARB_05-F_HAL_014.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/ARB_05-F_HAL_014.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/ARB_05-F_HAL_014.clustS.gz') 2016-10-03 10:01:57,535 pid=4262 [jointestimate.py] ERROR sample BME_04-G1_HAL_033 did not finish 2016-10-03 10:01:57,535 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BME_04-G1_HAL_033.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BME_04-G1_HAL_033.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BME_04-G1_HAL_033.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BME_04-G1_HAL_033.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BME_04-G1_HAL_033.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BME_04-G1_HAL_033.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BME_04-G1_HAL_033.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BME_04-G1_HAL_033.clustS.gz') 2016-10-03 10:01:57,536 pid=4262 [jointestimate.py] ERROR sample BME_01-G1_HAL_030 did not finish 2016-10-03 10:01:57,537 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BME_01-G1_HAL_030.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BME_01-G1_HAL_030.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BME_01-G1_HAL_030.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BME_01-G1_HAL_030.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BME_01-G1_HAL_030.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BME_01-G1_HAL_030.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BME_01-G1_HAL_030.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/BME_01-G1_HAL_030.clustS.gz') 2016-10-03 10:01:57,537 pid=4262 [jointestimate.py] ERROR sample DOF_17-G1_HAL_119 did not finish 2016-10-03 10:01:57,537 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/DOF_17-G1_HAL_119.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/DOF_17-G1_HAL_119.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/DOF_17-G1_HAL_119.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/DOF_17-G1_HAL_119.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/DOF_17-G1_HAL_119.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/DOF_17-G1_HAL_119.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/DOF_17-G1_HAL_119.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/DOF_17-G1_HAL_119.clustS.gz') 2016-10-03 10:01:58,041 pid=4262 [jointestimate.py] ERROR sample SPE_31-F_HAL_341 did not finish 2016-10-03 10:01:58,041 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_31-F_HAL_341.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_31-F_HAL_341.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_31-F_HAL_341.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_31-F_HAL_341.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_31-F_HAL_341.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_31-F_HAL_341.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_31-F_HAL_341.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SPE_31-F_HAL_341.clustS.gz') 2016-10-03 10:01:58,543 pid=4262 [jointestimate.py] ERROR sample ART_12_1-F_HAL_026 did not finish 2016-10-03 10:01:58,543 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ART_12_1-F_HAL_026.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ART_12_1-F_HAL_026.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ART_12_1-F_HAL_026.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ART_12_1-F_HAL_026.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ART_12_1-F_HAL_026.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ART_12_1-F_HAL_026.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ART_12_1-F_HAL_026.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ART_12_1-F_HAL_026.clustS.gz') 2016-10-03 10:01:58,545 pid=4262 [jointestimate.py] ERROR sample MVF_01-F_HAL_454 did not finish 2016-10-03 10:01:58,545 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MVF_01-F_HAL_454.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MVF_01-F_HAL_454.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MVF_01-F_HAL_454.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MVF_01-F_HAL_454.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MVF_01-F_HAL_454.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MVF_01-F_HAL_454.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MVF_01-F_HAL_454.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MVF_01-F_HAL_454.clustS.gz') 2016-10-03 10:01:59,046 pid=4262 [jointestimate.py] ERROR sample ARR_02-G1_HAL_016 did not finish 2016-10-03 10:01:59,047 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ARR_02-G1_HAL_016.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ARR_02-G1_HAL_016.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ARR_02-G1_HAL_016.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ARR_02-G1_HAL_016.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ARR_02-G1_HAL_016.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ARR_02-G1_HAL_016.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ARR_02-G1_HAL_016.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/ARR_02-G1_HAL_016.clustS.gz') 2016-10-03 10:01:59,549 pid=4262 [jointestimate.py] ERROR sample BEE_01A_1-G2_HAL_029 did not finish 2016-10-03 10:01:59,550 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BEE_01A_1-G2_HAL_029.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BEE_01A_1-G2_HAL_029.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BEE_01A_1-G2_HAL_029.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BEE_01A_1-G2_HAL_029.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BEE_01A_1-G2_HAL_029.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BEE_01A_1-G2_HAL_029.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BEE_01A_1-G2_HAL_029.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/BEE_01A_1-G2_HAL_029.clustS.gz') 2016-10-03 10:01:59,552 pid=4262 [jointestimate.py] ERROR sample HAL_NN_HAL_382 did not finish 2016-10-03 10:01:59,552 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HAL_NN_HAL_382.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HAL_NN_HAL_382.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HAL_NN_HAL_382.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HAL_NN_HAL_382.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HAL_NN_HAL_382.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HAL_NN_HAL_382.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HAL_NN_HAL_382.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/HAL_NN_HAL_382.clustS.gz') 2016-10-03 10:02:00,054 pid=4262 [jointestimate.py] ERROR sample PDF_06-G1_HAL_255 did not finish 2016-10-03 10:02:00,054 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDF_06-G1_HAL_255.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDF_06-G1_HAL_255.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDF_06-G1_HAL_255.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDF_06-G1_HAL_255.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDF_06-G1_HAL_255.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDF_06-G1_HAL_255.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDF_06-G1_HAL_255.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDF_06-G1_HAL_255.clustS.gz') 2016-10-03 10:02:00,557 pid=4262 [jointestimate.py] ERROR sample PCR_61-G2_HAL_240 did not finish 2016-10-03 10:02:00,557 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PCR_61-G2_HAL_240.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PCR_61-G2_HAL_240.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PCR_61-G2_HAL_240.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PCR_61-G2_HAL_240.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PCR_61-G2_HAL_240.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PCR_61-G2_HAL_240.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PCR_61-G2_HAL_240.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PCR_61-G2_HAL_240.clustS.gz') 2016-10-03 10:02:00,558 pid=4262 [jointestimate.py] ERROR sample COR_15-G1_HAL_101 did not finish 2016-10-03 10:02:00,558 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/COR_15-G1_HAL_101.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/COR_15-G1_HAL_101.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/COR_15-G1_HAL_101.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/COR_15-G1_HAL_101.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/COR_15-G1_HAL_101.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/COR_15-G1_HAL_101.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/COR_15-G1_HAL_101.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/COR_15-G1_HAL_101.clustS.gz') 2016-10-03 10:02:01,061 pid=4262 [jointestimate.py] ERROR sample PCR_04-F_HAL_228 did not finish 2016-10-03 10:02:01,061 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PCR_04-F_HAL_228.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PCR_04-F_HAL_228.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PCR_04-F_HAL_228.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PCR_04-F_HAL_228.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PCR_04-F_HAL_228.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PCR_04-F_HAL_228.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PCR_04-F_HAL_228.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/PCR_04-F_HAL_228.clustS.gz') 2016-10-03 10:02:01,563 pid=4262 [jointestimate.py] ERROR sample GNZ_30-F_HAL_492 did not finish 2016-10-03 10:02:01,563 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_30-F_HAL_492.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_30-F_HAL_492.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_30-F_HAL_492.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_30-F_HAL_492.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_30-F_HAL_492.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_30-F_HAL_492.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_30-F_HAL_492.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_30-F_HAL_492.clustS.gz') 2016-10-03 10:02:02,067 pid=4262 [jointestimate.py] ERROR sample BME_02-G2_HAL_031 did not finish 2016-10-03 10:02:02,068 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/BME_02-G2_HAL_031.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/BME_02-G2_HAL_031.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/BME_02-G2_HAL_031.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/BME_02-G2_HAL_031.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/BME_02-G2_HAL_031.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/BME_02-G2_HAL_031.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/BME_02-G2_HAL_031.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/BME_02-G2_HAL_031.clustS.gz') 2016-10-03 10:02:02,570 pid=4262 [jointestimate.py] ERROR sample COR_21-G1_HAL_105 did not finish 2016-10-03 10:02:02,570 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/COR_21-G1_HAL_105.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/COR_21-G1_HAL_105.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/COR_21-G1_HAL_105.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/COR_21-G1_HAL_105.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/COR_21-G1_HAL_105.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/COR_21-G1_HAL_105.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/COR_21-G1_HAL_105.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/COR_21-G1_HAL_105.clustS.gz') 2016-10-03 10:02:03,575 pid=4262 [jointestimate.py] ERROR sample UVL_01A_1-G4_HAL_376 did not finish 2016-10-03 10:02:03,576 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/UVL_01A_1-G4_HAL_376.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/UVL_01A_1-G4_HAL_376.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/UVL_01A_1-G4_HAL_376.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/UVL_01A_1-G4_HAL_376.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/UVL_01A_1-G4_HAL_376.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/UVL_01A_1-G4_HAL_376.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/UVL_01A_1-G4_HAL_376.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/UVL_01A_1-G4_HAL_376.clustS.gz') 2016-10-03 10:02:04,079 pid=4262 [jointestimate.py] ERROR sample PDB_04-G1_HAL_244 did not finish 2016-10-03 10:02:04,079 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PDB_04-G1_HAL_244.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PDB_04-G1_HAL_244.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PDB_04-G1_HAL_244.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PDB_04-G1_HAL_244.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PDB_04-G1_HAL_244.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PDB_04-G1_HAL_244.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PDB_04-G1_HAL_244.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/PDB_04-G1_HAL_244.clustS.gz') 2016-10-03 10:02:05,086 pid=4262 [jointestimate.py] ERROR sample COR_19-G1_HAL_104 did not finish 2016-10-03 10:02:05,087 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/COR_19-G1_HAL_104.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/COR_19-G1_HAL_104.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/COR_19-G1_HAL_104.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/COR_19-G1_HAL_104.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/COR_19-G1_HAL_104.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/COR_19-G1_HAL_104.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/COR_19-G1_HAL_104.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/COR_19-G1_HAL_104.clustS.gz') 2016-10-03 10:02:06,093 pid=4262 [jointestimate.py] ERROR sample LAR_01B_1-G1_FIL_193 did not finish 2016-10-03 10:02:06,093 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LAR_01B_1-G1_FIL_193.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LAR_01B_1-G1_FIL_193.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LAR_01B_1-G1_FIL_193.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LAR_01B_1-G1_FIL_193.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LAR_01B_1-G1_FIL_193.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LAR_01B_1-G1_FIL_193.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LAR_01B_1-G1_FIL_193.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/LAR_01B_1-G1_FIL_193.clustS.gz') 2016-10-03 10:02:07,599 pid=4262 [jointestimate.py] ERROR sample ARR_01A-G1_HAL_015 did not finish 2016-10-03 10:02:07,600 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ARR_01A-G1_HAL_015.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ARR_01A-G1_HAL_015.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ARR_01A-G1_HAL_015.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ARR_01A-G1_HAL_015.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ARR_01A-G1_HAL_015.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ARR_01A-G1_HAL_015.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ARR_01A-G1_HAL_015.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/ARR_01A-G1_HAL_015.clustS.gz') 2016-10-03 10:02:08,606 pid=4262 [jointestimate.py] ERROR sample HUE_19-G3_HAL_179 did not finish 2016-10-03 10:02:08,606 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/HUE_19-G3_HAL_179.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/HUE_19-G3_HAL_179.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/HUE_19-G3_HAL_179.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/HUE_19-G3_HAL_179.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/HUE_19-G3_HAL_179.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/HUE_19-G3_HAL_179.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/HUE_19-G3_HAL_179.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/HUE_19-G3_HAL_179.clustS.gz') 2016-10-03 10:02:10,114 pid=4262 [jointestimate.py] ERROR sample CKR_03-G1_HAL_068 did not finish 2016-10-03 10:02:10,114 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CKR_03-G1_HAL_068.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CKR_03-G1_HAL_068.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CKR_03-G1_HAL_068.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CKR_03-G1_HAL_068.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CKR_03-G1_HAL_068.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CKR_03-G1_HAL_068.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CKR_03-G1_HAL_068.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/CKR_03-G1_HAL_068.clustS.gz') 2016-10-03 10:05:02,487 pid=4262 [jointestimate.py] ERROR sample RAN_02-G1_HAL_279 did not finish 2016-10-03 10:05:02,488 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAN_02-G1_HAL_279.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAN_02-G1_HAL_279.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAN_02-G1_HAL_279.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAN_02-G1_HAL_279.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAN_02-G1_HAL_279.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAN_02-G1_HAL_279.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAN_02-G1_HAL_279.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/RAN_02-G1_HAL_279.clustS.gz') 2016-10-03 10:05:03,995 pid=4262 [jointestimate.py] ERROR sample PCR_02-F_HAL_226 did not finish 2016-10-03 10:05:03,996 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_02-F_HAL_226.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_02-F_HAL_226.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_02-F_HAL_226.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_02-F_HAL_226.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_02-F_HAL_226.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_02-F_HAL_226.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_02-F_HAL_226.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/PCR_02-F_HAL_226.clustS.gz') 2016-10-03 10:05:05,004 pid=4262 [jointestimate.py] ERROR sample ALI_05-G1_HAL_008 did not finish 2016-10-03 10:05:05,005 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ALI_05-G1_HAL_008.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ALI_05-G1_HAL_008.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ALI_05-G1_HAL_008.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ALI_05-G1_HAL_008.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ALI_05-G1_HAL_008.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ALI_05-G1_HAL_008.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ALI_05-G1_HAL_008.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/ALI_05-G1_HAL_008.clustS.gz') 2016-10-03 10:05:06,511 pid=4262 [jointestimate.py] ERROR sample SCG_05-F_HAL_394 did not finish 2016-10-03 10:05:06,512 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SCG_05-F_HAL_394.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SCG_05-F_HAL_394.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SCG_05-F_HAL_394.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SCG_05-F_HAL_394.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SCG_05-F_HAL_394.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SCG_05-F_HAL_394.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SCG_05-F_HAL_394.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SCG_05-F_HAL_394.clustS.gz') 2016-10-03 10:05:08,020 pid=4262 [jointestimate.py] ERROR sample SEP_04-F_HAL_472 did not finish 2016-10-03 10:05:08,020 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SEP_04-F_HAL_472.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SEP_04-F_HAL_472.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SEP_04-F_HAL_472.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SEP_04-F_HAL_472.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SEP_04-F_HAL_472.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SEP_04-F_HAL_472.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SEP_04-F_HAL_472.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SEP_04-F_HAL_472.clustS.gz') 2016-10-03 10:05:09,025 pid=4262 [jointestimate.py] ERROR sample LBY_03-G1_HAL_195 did not finish 2016-10-03 10:05:09,025 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/LBY_03-G1_HAL_195.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/LBY_03-G1_HAL_195.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/LBY_03-G1_HAL_195.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/LBY_03-G1_HAL_195.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/LBY_03-G1_HAL_195.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/LBY_03-G1_HAL_195.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/LBY_03-G1_HAL_195.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/LBY_03-G1_HAL_195.clustS.gz') 2016-10-03 10:05:10,031 pid=4262 [jointestimate.py] ERROR sample RAN_NN_HAL_384 did not finish 2016-10-03 10:05:10,031 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/RAN_NN_HAL_384.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/RAN_NN_HAL_384.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/RAN_NN_HAL_384.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/RAN_NN_HAL_384.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/RAN_NN_HAL_384.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/RAN_NN_HAL_384.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/RAN_NN_HAL_384.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/RAN_NN_HAL_384.clustS.gz') 2016-10-03 10:05:11,036 pid=4262 [jointestimate.py] ERROR sample PDT_06-F_HAL_430 did not finish 2016-10-03 10:05:11,037 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/PDT_06-F_HAL_430.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/PDT_06-F_HAL_430.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/PDT_06-F_HAL_430.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/PDT_06-F_HAL_430.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/PDT_06-F_HAL_430.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/PDT_06-F_HAL_430.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/PDT_06-F_HAL_430.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/PDT_06-F_HAL_430.clustS.gz') 2016-10-03 10:05:12,543 pid=4262 [jointestimate.py] ERROR sample LBY_02-F_HAL_194 did not finish 2016-10-03 10:05:12,544 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/LBY_02-F_HAL_194.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/LBY_02-F_HAL_194.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/LBY_02-F_HAL_194.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/LBY_02-F_HAL_194.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/LBY_02-F_HAL_194.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/LBY_02-F_HAL_194.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/LBY_02-F_HAL_194.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/LBY_02-F_HAL_194.clustS.gz') 2016-10-03 10:05:13,548 pid=4262 [jointestimate.py] ERROR sample PDB_08-F_HAL_248 did not finish 2016-10-03 10:05:13,548 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDB_08-F_HAL_248.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDB_08-F_HAL_248.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDB_08-F_HAL_248.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDB_08-F_HAL_248.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDB_08-F_HAL_248.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDB_08-F_HAL_248.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDB_08-F_HAL_248.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/PDB_08-F_HAL_248.clustS.gz') 2016-10-03 10:05:14,554 pid=4262 [jointestimate.py] ERROR sample CRC_04-G1_HAL_110 did not finish 2016-10-03 10:05:14,555 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CRC_04-G1_HAL_110.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CRC_04-G1_HAL_110.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CRC_04-G1_HAL_110.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CRC_04-G1_HAL_110.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CRC_04-G1_HAL_110.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CRC_04-G1_HAL_110.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CRC_04-G1_HAL_110.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CRC_04-G1_HAL_110.clustS.gz') 2016-10-03 10:05:16,061 pid=4262 [jointestimate.py] ERROR sample CCL_05-F_HAL_053 did not finish 2016-10-03 10:05:16,061 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CCL_05-F_HAL_053.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CCL_05-F_HAL_053.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CCL_05-F_HAL_053.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CCL_05-F_HAL_053.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CCL_05-F_HAL_053.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CCL_05-F_HAL_053.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CCL_05-F_HAL_053.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CCL_05-F_HAL_053.clustS.gz') 2016-10-03 10:05:17,067 pid=4262 [jointestimate.py] ERROR sample MAH_03-F_HAL_447 did not finish 2016-10-03 10:05:17,067 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/MAH_03-F_HAL_447.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/MAH_03-F_HAL_447.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/MAH_03-F_HAL_447.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/MAH_03-F_HAL_447.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/MAH_03-F_HAL_447.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/MAH_03-F_HAL_447.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/MAH_03-F_HAL_447.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/MAH_03-F_HAL_447.clustS.gz') 2016-10-03 10:05:18,572 pid=4262 [jointestimate.py] ERROR sample MAH_02-F_HAL_446 did not finish 2016-10-03 10:05:18,572 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MAH_02-F_HAL_446.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MAH_02-F_HAL_446.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MAH_02-F_HAL_446.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MAH_02-F_HAL_446.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MAH_02-F_HAL_446.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MAH_02-F_HAL_446.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MAH_02-F_HAL_446.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/MAH_02-F_HAL_446.clustS.gz') 2016-10-03 10:05:19,579 pid=4262 [jointestimate.py] ERROR sample AWR_01_1-G2_FIL_027 did not finish 2016-10-03 10:05:19,579 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/AWR_01_1-G2_FIL_027.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/AWR_01_1-G2_FIL_027.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/AWR_01_1-G2_FIL_027.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/AWR_01_1-G2_FIL_027.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/AWR_01_1-G2_FIL_027.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/AWR_01_1-G2_FIL_027.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/AWR_01_1-G2_FIL_027.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/AWR_01_1-G2_FIL_027.clustS.gz') 2016-10-03 10:05:21,087 pid=4262 [jointestimate.py] ERROR sample ESE_03-G1_HAL_141 did not finish 2016-10-03 10:05:21,087 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ESE_03-G1_HAL_141.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ESE_03-G1_HAL_141.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ESE_03-G1_HAL_141.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ESE_03-G1_HAL_141.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ESE_03-G1_HAL_141.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ESE_03-G1_HAL_141.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ESE_03-G1_HAL_141.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ESE_03-G1_HAL_141.clustS.gz') 2016-10-03 10:05:22,090 pid=4262 [jointestimate.py] ERROR sample GNZ_33-F_HAL_495 did not finish 2016-10-03 10:05:22,091 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GNZ_33-F_HAL_495.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GNZ_33-F_HAL_495.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GNZ_33-F_HAL_495.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GNZ_33-F_HAL_495.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GNZ_33-F_HAL_495.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GNZ_33-F_HAL_495.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GNZ_33-F_HAL_495.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/GNZ_33-F_HAL_495.clustS.gz') 2016-10-03 10:05:23,597 pid=4262 [jointestimate.py] ERROR sample SCG_04-F_HAL_393 did not finish 2016-10-03 10:05:23,597 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SCG_04-F_HAL_393.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SCG_04-F_HAL_393.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SCG_04-F_HAL_393.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SCG_04-F_HAL_393.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SCG_04-F_HAL_393.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SCG_04-F_HAL_393.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SCG_04-F_HAL_393.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/SCG_04-F_HAL_393.clustS.gz') 2016-10-03 10:05:25,104 pid=4262 [jointestimate.py] ERROR sample CCL_04-F_HAL_052 did not finish 2016-10-03 10:05:25,104 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CCL_04-F_HAL_052.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CCL_04-F_HAL_052.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CCL_04-F_HAL_052.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CCL_04-F_HAL_052.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CCL_04-F_HAL_052.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CCL_04-F_HAL_052.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CCL_04-F_HAL_052.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CCL_04-F_HAL_052.clustS.gz') 2016-10-03 10:05:38,665 pid=4262 [jointestimate.py] ERROR sample SRG_07-F_HAL_401 did not finish 2016-10-03 10:05:38,665 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SRG_07-F_HAL_401.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SRG_07-F_HAL_401.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SRG_07-F_HAL_401.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SRG_07-F_HAL_401.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SRG_07-F_HAL_401.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SRG_07-F_HAL_401.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SRG_07-F_HAL_401.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SRG_07-F_HAL_401.clustS.gz') 2016-10-03 10:05:40,173 pid=4262 [jointestimate.py] ERROR sample FIL_02A-G3_FIL_143 did not finish 2016-10-03 10:05:40,173 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/FIL_02A-G3_FIL_143.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/FIL_02A-G3_FIL_143.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/FIL_02A-G3_FIL_143.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/FIL_02A-G3_FIL_143.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/FIL_02A-G3_FIL_143.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/FIL_02A-G3_FIL_143.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/FIL_02A-G3_FIL_143.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/FIL_02A-G3_FIL_143.clustS.gz') 2016-10-03 10:05:41,178 pid=4262 [jointestimate.py] ERROR sample GNZ_25-F_HAL_487 did not finish 2016-10-03 10:05:41,178 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_25-F_HAL_487.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_25-F_HAL_487.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_25-F_HAL_487.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_25-F_HAL_487.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_25-F_HAL_487.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_25-F_HAL_487.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_25-F_HAL_487.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_25-F_HAL_487.clustS.gz') 2016-10-03 10:05:42,684 pid=4262 [jointestimate.py] ERROR sample CRC_07-G1_HAL_113 did not finish 2016-10-03 10:05:42,685 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CRC_07-G1_HAL_113.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CRC_07-G1_HAL_113.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CRC_07-G1_HAL_113.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CRC_07-G1_HAL_113.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CRC_07-G1_HAL_113.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CRC_07-G1_HAL_113.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CRC_07-G1_HAL_113.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/CRC_07-G1_HAL_113.clustS.gz') 2016-10-03 10:05:43,690 pid=4262 [jointestimate.py] ERROR sample ELG_08-F_HAL_130 did not finish 2016-10-03 10:05:43,690 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ELG_08-F_HAL_130.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ELG_08-F_HAL_130.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ELG_08-F_HAL_130.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ELG_08-F_HAL_130.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ELG_08-F_HAL_130.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ELG_08-F_HAL_130.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ELG_08-F_HAL_130.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ELG_08-F_HAL_130.clustS.gz') 2016-10-03 10:05:44,696 pid=4262 [jointestimate.py] ERROR sample RAN_NN_HAL_385 did not finish 2016-10-03 10:05:44,696 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/RAN_NN_HAL_385.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/RAN_NN_HAL_385.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/RAN_NN_HAL_385.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/RAN_NN_HAL_385.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/RAN_NN_HAL_385.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/RAN_NN_HAL_385.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/RAN_NN_HAL_385.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/RAN_NN_HAL_385.clustS.gz') 2016-10-03 10:05:46,202 pid=4262 [jointestimate.py] ERROR sample SPE_02-G1_HAL_328 did not finish 2016-10-03 10:05:46,203 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SPE_02-G1_HAL_328.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SPE_02-G1_HAL_328.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SPE_02-G1_HAL_328.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SPE_02-G1_HAL_328.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SPE_02-G1_HAL_328.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SPE_02-G1_HAL_328.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SPE_02-G1_HAL_328.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/SPE_02-G1_HAL_328.clustS.gz') 2016-10-03 10:05:47,207 pid=4262 [jointestimate.py] ERROR sample FIL_01_1-G1_FIL_142 did not finish 2016-10-03 10:05:47,207 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/FIL_01_1-G1_FIL_142.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/FIL_01_1-G1_FIL_142.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/FIL_01_1-G1_FIL_142.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/FIL_01_1-G1_FIL_142.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/FIL_01_1-G1_FIL_142.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/FIL_01_1-G1_FIL_142.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/FIL_01_1-G1_FIL_142.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/FIL_01_1-G1_FIL_142.clustS.gz') 2016-10-03 10:05:48,715 pid=4262 [jointestimate.py] ERROR sample CKR_08-G1_HAL_071 did not finish 2016-10-03 10:05:48,715 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CKR_08-G1_HAL_071.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CKR_08-G1_HAL_071.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CKR_08-G1_HAL_071.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CKR_08-G1_HAL_071.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CKR_08-G1_HAL_071.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CKR_08-G1_HAL_071.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CKR_08-G1_HAL_071.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/CKR_08-G1_HAL_071.clustS.gz') 2016-10-03 10:05:49,721 pid=4262 [jointestimate.py] ERROR sample SRG_06-F_HAL_400 did not finish 2016-10-03 10:05:49,721 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SRG_06-F_HAL_400.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SRG_06-F_HAL_400.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SRG_06-F_HAL_400.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SRG_06-F_HAL_400.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SRG_06-F_HAL_400.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SRG_06-F_HAL_400.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SRG_06-F_HAL_400.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SRG_06-F_HAL_400.clustS.gz') 2016-10-03 10:05:51,227 pid=4262 [jointestimate.py] ERROR sample GNZ_23-F_HAL_485 did not finish 2016-10-03 10:05:51,227 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_23-F_HAL_485.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_23-F_HAL_485.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_23-F_HAL_485.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_23-F_HAL_485.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_23-F_HAL_485.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_23-F_HAL_485.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_23-F_HAL_485.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/GNZ_23-F_HAL_485.clustS.gz') 2016-10-03 10:06:00,766 pid=4262 [jointestimate.py] ERROR sample SPE_07-G1_HAL_330 did not finish 2016-10-03 10:06:00,766 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SPE_07-G1_HAL_330.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SPE_07-G1_HAL_330.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SPE_07-G1_HAL_330.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SPE_07-G1_HAL_330.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SPE_07-G1_HAL_330.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SPE_07-G1_HAL_330.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SPE_07-G1_HAL_330.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/SPE_07-G1_HAL_330.clustS.gz') 2016-10-03 10:06:48,453 pid=4262 [jointestimate.py] ERROR sample GNZ_29-F_HAL_491 did not finish 2016-10-03 10:06:48,454 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GNZ_29-F_HAL_491.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GNZ_29-F_HAL_491.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GNZ_29-F_HAL_491.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GNZ_29-F_HAL_491.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GNZ_29-F_HAL_491.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GNZ_29-F_HAL_491.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GNZ_29-F_HAL_491.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/GNZ_29-F_HAL_491.clustS.gz') 2016-10-03 10:06:49,457 pid=4262 [jointestimate.py] ERROR sample CCG_01-G1_HAL_044 did not finish 2016-10-03 10:06:49,458 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CCG_01-G1_HAL_044.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CCG_01-G1_HAL_044.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CCG_01-G1_HAL_044.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CCG_01-G1_HAL_044.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CCG_01-G1_HAL_044.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CCG_01-G1_HAL_044.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CCG_01-G1_HAL_044.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/CCG_01-G1_HAL_044.clustS.gz') 2016-10-03 10:06:50,965 pid=4262 [jointestimate.py] ERROR sample MAH_01-F_HAL_445 did not finish 2016-10-03 10:06:50,965 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MAH_01-F_HAL_445.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MAH_01-F_HAL_445.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MAH_01-F_HAL_445.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MAH_01-F_HAL_445.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MAH_01-F_HAL_445.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MAH_01-F_HAL_445.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MAH_01-F_HAL_445.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/MAH_01-F_HAL_445.clustS.gz') 2016-10-03 10:06:50,966 pid=4262 [jointestimate.py] ERROR sample CDM_03_F_HAL_586 did not finish 2016-10-03 10:06:50,966 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CDM_03_F_HAL_586.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CDM_03_F_HAL_586.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CDM_03_F_HAL_586.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CDM_03_F_HAL_586.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CDM_03_F_HAL_586.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CDM_03_F_HAL_586.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CDM_03_F_HAL_586.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/CDM_03_F_HAL_586.clustS.gz') 2016-10-03 10:06:51,970 pid=4262 [jointestimate.py] ERROR sample COM_12-G2_HAL_089 did not finish 2016-10-03 10:06:51,970 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/COM_12-G2_HAL_089.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/COM_12-G2_HAL_089.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/COM_12-G2_HAL_089.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/COM_12-G2_HAL_089.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/COM_12-G2_HAL_089.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/COM_12-G2_HAL_089.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/COM_12-G2_HAL_089.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panf_clust_0.88/COM_12-G2_HAL_089.clustS.gz') 2016-10-03 10:06:51,971 pid=4262 [jointestimate.py] ERROR sample SEP_03-F_HAL_471 did not finish 2016-10-03 10:06:51,971 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SEP_03-F_HAL_471.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SEP_03-F_HAL_471.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SEP_03-F_HAL_471.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SEP_03-F_HAL_471.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SEP_03-F_HAL_471.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SEP_03-F_HAL_471.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SEP_03-F_HAL_471.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pand_clust_0.88/SEP_03-F_HAL_471.clustS.gz') 2016-10-03 10:06:53,477 pid=4262 [jointestimate.py] ERROR sample SPE_34-G1_HAL_344 did not finish 2016-10-03 10:06:53,477 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SPE_34-G1_HAL_344.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SPE_34-G1_HAL_344.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SPE_34-G1_HAL_344.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SPE_34-G1_HAL_344.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SPE_34-G1_HAL_344.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SPE_34-G1_HAL_344.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SPE_34-G1_HAL_344.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pane_clust_0.88/SPE_34-G1_HAL_344.clustS.gz') 2016-10-03 10:06:54,481 pid=4262 [jointestimate.py] ERROR sample CCG_02_1-G1_HAL_045 did not finish 2016-10-03 10:06:54,481 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CCG_02_1-G1_HAL_045.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CCG_02_1-G1_HAL_045.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CCG_02_1-G1_HAL_045.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CCG_02_1-G1_HAL_045.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CCG_02_1-G1_HAL_045.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CCG_02_1-G1_HAL_045.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CCG_02_1-G1_HAL_045.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panb_clust_0.88/CCG_02_1-G1_HAL_045.clustS.gz') 2016-10-03 10:06:55,487 pid=4262 [jointestimate.py] ERROR sample GNZ_32_1-F_HAL_494 did not finish 2016-10-03 10:06:55,487 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_32_1-F_HAL_494.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_32_1-F_HAL_494.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_32_1-F_HAL_494.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_32_1-F_HAL_494.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_32_1-F_HAL_494.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_32_1-F_HAL_494.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_32_1-F_HAL_494.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_32_1-F_HAL_494.clustS.gz') 2016-10-03 10:06:56,992 pid=4262 [jointestimate.py] ERROR sample GNZ_22_1-F_HAL_484 did not finish 2016-10-03 10:06:56,993 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GNZ_22_1-F_HAL_484.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GNZ_22_1-F_HAL_484.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GNZ_22_1-F_HAL_484.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GNZ_22_1-F_HAL_484.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GNZ_22_1-F_HAL_484.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GNZ_22_1-F_HAL_484.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GNZ_22_1-F_HAL_484.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/GNZ_22_1-F_HAL_484.clustS.gz') 2016-10-03 10:06:57,996 pid=4262 [jointestimate.py] ERROR sample WBW_10_1-G1_HAL_378 did not finish 2016-10-03 10:06:57,996 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/WBW_10_1-G1_HAL_378.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/WBW_10_1-G1_HAL_378.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/WBW_10_1-G1_HAL_378.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/WBW_10_1-G1_HAL_378.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/WBW_10_1-G1_HAL_378.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/WBW_10_1-G1_HAL_378.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/WBW_10_1-G1_HAL_378.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/WBW_10_1-G1_HAL_378.clustS.gz') 2016-10-03 10:06:59,000 pid=4262 [jointestimate.py] ERROR sample PDT_07-F_HAL_431 did not finish 2016-10-03 10:06:59,001 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDT_07-F_HAL_431.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDT_07-F_HAL_431.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDT_07-F_HAL_431.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDT_07-F_HAL_431.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDT_07-F_HAL_431.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDT_07-F_HAL_431.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDT_07-F_HAL_431.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/PDT_07-F_HAL_431.clustS.gz') 2016-10-03 10:07:00,005 pid=4262 [jointestimate.py] ERROR sample SCG_03-F_HAL_392 did not finish 2016-10-03 10:07:00,005 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SCG_03-F_HAL_392.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SCG_03-F_HAL_392.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SCG_03-F_HAL_392.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SCG_03-F_HAL_392.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SCG_03-F_HAL_392.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SCG_03-F_HAL_392.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SCG_03-F_HAL_392.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panc_clust_0.88/SCG_03-F_HAL_392.clustS.gz') 2016-10-03 10:07:00,508 pid=4262 [jointestimate.py] ERROR sample GNZ_28_1-F_HAL_490 did not finish 2016-10-03 10:07:00,508 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_28_1-F_HAL_490.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_28_1-F_HAL_490.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_28_1-F_HAL_490.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_28_1-F_HAL_490.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_28_1-F_HAL_490.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_28_1-F_HAL_490.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_28_1-F_HAL_490.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/GNZ_28_1-F_HAL_490.clustS.gz') 2016-10-03 10:07:01,010 pid=4262 [jointestimate.py] ERROR sample SPE_37-F_HAL_347 did not finish 2016-10-03 10:07:01,010 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPE_37-F_HAL_347.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPE_37-F_HAL_347.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPE_37-F_HAL_347.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPE_37-F_HAL_347.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPE_37-F_HAL_347.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPE_37-F_HAL_347.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPE_37-F_HAL_347.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/SPE_37-F_HAL_347.clustS.gz') 2016-10-03 10:07:01,511 pid=4262 [jointestimate.py] ERROR sample CNF_04-G1_HAL_087 did not finish 2016-10-03 10:07:01,512 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CNF_04-G1_HAL_087.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CNF_04-G1_HAL_087.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CNF_04-G1_HAL_087.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CNF_04-G1_HAL_087.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CNF_04-G1_HAL_087.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CNF_04-G1_HAL_087.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CNF_04-G1_HAL_087.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pank_clust_0.88/CNF_04-G1_HAL_087.clustS.gz') 2016-10-03 10:07:02,015 pid=4262 [jointestimate.py] ERROR sample BUS_08-F_HAL_043 did not finish 2016-10-03 10:07:02,015 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/BUS_08-F_HAL_043.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/BUS_08-F_HAL_043.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/BUS_08-F_HAL_043.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/BUS_08-F_HAL_043.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/BUS_08-F_HAL_043.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/BUS_08-F_HAL_043.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/BUS_08-F_HAL_043.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panl_clust_0.88/BUS_08-F_HAL_043.clustS.gz') 2016-10-03 10:07:06,530 pid=4262 [jointestimate.py] ERROR sample ART_08-F_HAL_022 did not finish 2016-10-03 10:07:06,530 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ART_08-F_HAL_022.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ART_08-F_HAL_022.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ART_08-F_HAL_022.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ART_08-F_HAL_022.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ART_08-F_HAL_022.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ART_08-F_HAL_022.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ART_08-F_HAL_022.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panj_clust_0.88/ART_08-F_HAL_022.clustS.gz') 2016-10-03 10:07:07,533 pid=4262 [jointestimate.py] ERROR sample GNZ_24_1-F_HAL_486 did not finish 2016-10-03 10:07:07,533 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_24_1-F_HAL_486.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_24_1-F_HAL_486.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_24_1-F_HAL_486.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_24_1-F_HAL_486.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_24_1-F_HAL_486.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_24_1-F_HAL_486.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_24_1-F_HAL_486.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pani_clust_0.88/GNZ_24_1-F_HAL_486.clustS.gz') 2016-10-03 10:07:09,038 pid=4262 [jointestimate.py] ERROR sample COR_11-G1_HAL_097 did not finish 2016-10-03 10:07:09,039 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_11-G1_HAL_097.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_11-G1_HAL_097.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_11-G1_HAL_097.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_11-G1_HAL_097.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_11-G1_HAL_097.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_11-G1_HAL_097.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_11-G1_HAL_097.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/panh_clust_0.88/COR_11-G1_HAL_097.clustS.gz') 2016-10-03 10:07:10,544 pid=4262 [jointestimate.py] ERROR sample ELG_03-F_HAL_126 did not finish 2016-10-03 10:07:10,544 pid=4262 [jointestimate.py] ERROR stdout: stderr: error: IOError([Errno 20] Not a directory: '/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_03-F_HAL_126.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_03-F_HAL_126.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_03-F_HAL_126.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_03-F_HAL_126.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_03-F_HAL_126.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_03-F_HAL_126.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_03-F_HAL_126.clustS.gz/scratch/01982/jdpalaci/ddrad/f_SE-88_ipyrad/pang_clust_0.88/ELG_03-F_HAL_126.clustS.gz')